PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KXZ46988.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Volvocaceae; Gonium
Family C2H2
Protein Properties Length: 168aa    MW: 17589.9 Da    PI: 7.4079
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KXZ46988.1genomeGPGRPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.20.000131536323
                ETTTTEEESSHHHHHHHHHH.T CS
     zf-C2H2  3 CpdCgksFsrksnLkrHirt.H 23
                C +C++ F +   L +H+++ H
  KXZ46988.1 15 CYYCDRIFDDEAALIVHQKNkH 36
                99*****************988 PP

2zf-C2H212.40.000473756120
                EEETTTTEEESSHHHHHHHH CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHi 20
                +kCp C++  ++   L +H 
  KXZ46988.1 37 FKCPECNRKMNTAQGLATHA 56
                89*****************6 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576672.72E-51159No hitNo description
PROSITE patternPS0002801336IPR007087Zinc finger, C2H2
SMARTSM003551.11336IPR015880Zinc finger, C2H2-like
SMARTSM003550.13760IPR015880Zinc finger, C2H2-like
PROSITE profilePS501578.7673760IPR007087Zinc finger, C2H2
PROSITE patternPS0002803960IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009910Biological Processnegative regulation of flower development
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0042803Molecular Functionprotein homodimerization activity
GO:0046872Molecular Functionmetal ion binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    Send to blast
MGKKKKNKEQ EICFCYYCDR IFDDEAALIV HQKNKHFKCP ECNRKMNTAQ GLATHAFQVH  60
KLTISSVPAA KAGRDSMSVE IFGMAGVPDD VRPAKLQGAP PPGAAPPAGA PASNAPAPGA  120
AAAGAAAAAA GDGSVVVWTD EDYSIEERRA QLPRYAVAVP VDDLNGAS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002947469.12e-60hypothetical protein VOLCADRAFT_79631, partial
SwissprotQ9C5G04e-32SUF4_ARATH; Protein SUPPRESSOR OF FRI 4
TrEMBLA0A150GB001e-121A0A150GB00_GONPE; Uncharacterized protein
STRINGEDP051233e-59(Chlamydomonas reinhardtii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP41351011
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30970.19e-32C2H2 family protein