PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KXZ46292.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Volvocaceae; Gonium
Family SBP
Protein Properties Length: 1653aa    MW: 165317 Da    PI: 7.1813
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KXZ46292.1genomeGPGRPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP73.73.2e-231890574
                TT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT--...----- CS
         SBP  5 egCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakh...nerrr 74
                 gC+  l++ k y++r+k+Ce h k+p++ ++g+  r CqqC+rfh+ls f+ +kr+Cr +L++     errr
  KXZ46292.1 18 VGCSRSLQNSKLYYQRFKLCEDHLKSPAISIDGVLSRLCQQCGRFHDLSAFEGKKRTCRAQLDRIrrtKERRR 90
                58**********************************************************9986411133444 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5114119.111289IPR004333Transcription factor, SBP-box
PfamPF031104.8E-241890IPR004333Transcription factor, SBP-box
Gene3DG3DSA:4.10.1100.107.1E-221876IPR004333Transcription factor, SBP-box
SuperFamilySSF1036122.65E-201989IPR004333Transcription factor, SBP-box
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1653 aa     Download sequence    Send to blast
MAAHQPWDPD DYNWDGIVGC SRSLQNSKLY YQRFKLCEDH LKSPAISIDG VLSRLCQQCG  60
RFHDLSAFEG KKRTCRAQLD RIRRTKERRR VPGSTAANSD SPDYSGEGDR DTLAQAGSTS  120
SGSGEREVRP KRGGRGGGGG GSAAGRSTAS GGDGGVSDPR VGGLLYGSQG LEGGSPLSNG  180
YGVRHLLGVQ ALCAQPFQAN GGGDCGRYDR SVLAPALSPV NLQLQSTGSG QGAAVLVGPA  240
LDMPEGQAAL GPASGGGSGA IQGLLWPMGP DPGVRQGQHG QLLDPMAAYP APAGLRSVSS  300
APPWLGQTLG QLSPSDSRPP APYYFPPEAS GPNKLSTAVP LGAGTGMGVG SAPGLLHAAV  360
VPGLGNGGGG SGDGGTALIE PHALLSQPLW ADYPGLQQQQ QQQQQQQQRL QNQLKLGEAG  420
GGGAGGGRPA AVSAAVVSHN GPHALAAAGH APSSSTAEAM AAAARLGYGG TAGGGGGAPA  480
DMMDAELLRM LEELEDQAAA DGGRDGGRHG ASNGSLGPGP DRDSLAGSAA AQRQQHLGHL  540
PGRENRHDGR PHTTIGALLF SEISGRLAAE NARAGGGGGA GSGSGGIGGG GSNSSAGAGP  600
SGGGSGTGSA RAGALAQMLM PVCSGGSASS CDGEGRSRQQ TGGLLNLSDS PMEVAGGSTH  660
TPELSAAVTA AQPPQFMASG SGGGVTAAAA ARLGPLSAVA ASAEASQLSE FLKKLSESKS  720
SSSGSGTDLM DIYESMLRQG LLNEPYDAGR PGDPSAMAAA AEAFAGGELA AFNGGGGVLM  780
QHLQQLQQQQ AAQAQMIPQH QQEQLQQQAA FLHQQQEQQQ QQQQFPAQPQ HNQHNSHIDS  840
YRQIDNNYPN PPQQRHDQIL QHQQQHHQHQ HQHQQLLREG ALERHISTAC AAAPTHYAAG  900
GGGHGGAVSA GGGAPYVARD AVSRVTLKMM NCLPEELPPA LRSNLQAWVS AGAAAEVLHA  960
CMRPDNELIL EVGELVLRAP PGQTPVLSTW EEAAAAFAVE DGEDDAAGGN DSDAAAVAAG  1020
ARDAPAAATA AAAAAGARPG GGRRLRPTLR GCSLAAARSA SVVSMQISGQ GLCGPGVTLL  1080
ARMGGQRARL ASCKAAAARP AAETVLSVLV EPPRPAGLLV LEARRGRLLG SWWPLVVVPE  1140
PEVAAELNDL ARQEERGVHQ PQLGAGGAGG ATAVSSDWLR AFLIDLGQIL DWTTAKAVRD  1200
DRTASSYGRG GGGVPARPAA GGAMMTSWNS DSEDAEAAAL PTAPEAPATA GPRRRGGSGA  1260
GAAVRSRALA AIREADGNLE RRLSFKACRL LAFSVVRGLP HTAAMIWRLL GPAGLGMPPA  1320
SVCDHALYDG EGLLACAVRS RCTATLASLL PLVAPSWPAR ELSRLGPSGV SPLHLAASLP  1380
GCAAVAGALL VSLPDAPVLW FTHRSAAGAT AAELAAAAAA GGGAAGATLN ALASRLLKAA  1440
MAGPTAATHG WAPPPNAAAA SAIAVRAAAD DAGADVAGDL AAAAGAAPPM PTARAVPTTM  1500
FVAVTPAASW DSGSGSVVST TRRHLSSKMN SEEQELEAGP DSAGGAAGPA PVPAPPASLR  1560
AAGNTPPPAV PSAAALPPSG PAPAASGPSL AAPAPPPAAA SAAAAAAAGP SSQAAQRAAP  1620
SKGGLSSWLK KLVRGGKSKD AEERKGAPPR GQL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ul4_A4e-1420901683squamosa promoter binding protein-like 4
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1132140GGRGGGGGG
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A150G8W60.0A0A150G8W6_GONPE; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP2012101
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50670.12e-15SBP family protein