PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.16G090900.1.p
Common NameGLYMA_16G090900, LOC100795938
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 390aa    MW: 43687.9 Da    PI: 5.2864
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.16G090900.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.22e-10203245754
                          HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                  HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                            Er+RR ++ s+f+ L+el+P++      K + a+++  A++YI++L
  Glyma.16G090900.1.p 203 TTERQRRVDLSSKFDALKELIPNP-----SKSDRASVVGDAINYIREL 245
                          57*********************9.....79***************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.21E-13194269IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.29E-10194250No hitNo description
PROSITE profilePS5088814.094196245IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.3E-11197259IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.9E-10202251IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.9E-8203245IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 390 aa     Download sequence    Send to blast
MSSVWCGPKM YEESSCYDPD AMMAEGAEDC FPQMVSESEA VMSATPTQTH THNTFAYSYS  60
CGEDAANANG PIAMEHPQQN PYNYSNTQFV EELYSNQQFT YHTPTPDLLD LLHLPNPIPG  120
DNRTNVSSVS YDPYLHLNLQ QQQQPTLREL LPHMPALRND FPFGGAAGGD DIQDFGNGLV  180
DFTQQEVGKR RGGKRTKQFT STTTERQRRV DLSSKFDALK ELIPNPSKSD RASVVGDAIN  240
YIRELKRTVE ELKLLVEKKR LEKQRVMMRH KVETEGESSN LDPAEYSESL RSSWIQRKTK  300
DTEVDVRIVD NEVTIKLVQR KKIDCLVHVS HLLDQLNLDL QHVAGGHIGD FCSYLFNTKI  360
CEGSSIYASA IANKLIQVMD TSLAAASLA*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150341e-101AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003548659.20.0PREDICTED: transcription factor bHLH91-like
RefseqXP_014624034.10.0PREDICTED: transcription factor bHLH91-like
TrEMBLK7MG350.0K7MG35_SOYBN; Uncharacterized protein
STRINGGLYMA16G12132.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP26591431
FabidsOGEF14498811
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31210.16e-52bHLH family protein