PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.14G089600.2.p
Common NameGLYMA_14G089600, LOC100801930
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 430aa    MW: 46127 Da    PI: 6.2757
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.14G089600.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.14.3e-10272320355
                          HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                           +h+ +Er RR++i +++  L+el+P +    +k   Ka +L + ++Y++sLq
  Glyma.14G089600.2.p 272 NSHSLAERVRREKISERMRLLQELVPGC----NKITGKAVMLDEIINYVQSLQ 320
                          58**************************....999*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000833.50E-11267324No hitNo description
SuperFamilySSF474595.89E-17267337IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.485269319IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.3E-16270337IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.8E-7272320IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.6E-10275325IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009637Biological Processresponse to blue light
GO:0005634Cellular Componentnucleus
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 430 aa     Download sequence    Send to blast
MGGQENAMGF QHGNESILTC PTSGLSGANV NVSEMAISSV SIAKPSDVVN PFIASSAWDP  60
LVSLSQVQSF GGSSMVSHSE FANSNSSYPL VLDNQGISNT SHLVQYMSDS NLGGMVPKVH  120
SYASGGFSEM VGAGSFCQHR SADMANTGYP IHYNPIKEAP INGEQSQVED SIPEEEAPGS  180
APSGNRRKRG LDHNSTFSPN KNAEGDAVND SPGKASNGPK EHEKRPKGEQ NNGADVRGKQ  240
SVKQAKDNNS QSGEAPKENF IHVRARRGQA TNSHSLAERV RREKISERMR LLQELVPGCN  300
KITGKAVMLD EIINYVQSLQ QQVEFLSMKL ATVNPELNFD VDRILSKDIL QSRIGHGIGA  360
YGPGINSSHT FPNGSFHGTL AGMPSTSSQF PPLPQNVLDH EFQSFYGIGY DSNTALDNLE  420
PNGRLKTEL*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.328490.0epicotyl| flower| hypocotyl| root
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00135DAPTransfer from AT1G10120Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150360.0AP015036.1 Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003544498.10.0PREDICTED: transcription factor bHLH74-like
RefseqXP_014622566.10.0PREDICTED: transcription factor bHLH74-like
TrEMBLI1M8W60.0I1M8W6_SOYBN; Uncharacterized protein
STRINGGLYMA14G10180.10.0(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10120.14e-81bHLH family protein