PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.08G265600.1.p
Common NameGLYMA_08G265600, LOC100101912
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bZIP
Protein Properties Length: 418aa    MW: 44835.2 Da    PI: 6.658
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.08G265600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_169.55.1e-22308370163
                          XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                          e+elkr+rrkq+NRe+ArrsR+RK+ae++eL++++++L++eN +L++e+++++ e+++l+se+
  Glyma.08G265600.1.p 308 ERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEALKEENATLRSEVSQIRSEYEQLRSEN 370
                          89***********************************************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077772.4E-29196IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165961.7E-54135275No hitNo description
Gene3DG3DSA:1.20.5.1706.9E-19302368No hitNo description
PfamPF001706.1E-21308370IPR004827Basic-leucine zipper domain
SMARTSM003386.4E-23308372IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.955310373IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.44E-11311368No hitNo description
CDDcd147024.39E-24313363No hitNo description
PROSITE patternPS000360315330IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 418 aa     Download sequence    Send to blast
MGSSDMDKTP KEKESKTPPA TSQEQSSTTA MPTTNPDWSN FQTYSPIPPH GFLASSPQAH  60
PYMWGVQHYM PPYGTPPHPY VAMYPHGGIY AHPSIPPGSY PFSPFAMASP NGIADASGNA  120
PGRIEVGGKP PEVKEKLPIK RSKGSASGGN LNMWITGKNN EPGKIPGESA NGIHSKSGES  180
ASDGTSEGSD ENSQNDSQLK SRERQDSFED EPSQNGSSVH APQNGVHNRP QTVVNQTMSI  240
LPISTTSAPG AVPGPTTNLN IGMDYWGTPT SSTIPALHGK VPSTAVAGGM IAAGSRDGVQ  300
SQVWLQDERE LKRQRRKQSN RESARRSRLR KQAECDELAQ RAEALKEENA TLRSEVSQIR  360
SEYEQLRSEN AALKERLGDI PGVATPGKED LRSGQNDQHV SNDTQQSGQT EVVQGVH*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1324330RRSRLRK
2324331RRSRLRKQ
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.291280.0cotyledon| root| stem
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds to the G-box motif (5'-CACGTG-3') and other cis-acting elements with 5'-ACGT-3' core, such as Hex, C-box and as-1 motifs. Possesses high binding affinity to G-box, much lower affinity to Hex and C-box, and little affinity to as-1 element (PubMed:18315949). G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control (Probable). Binds to the G-box motif 5'-CACGTG-3' of LHCB2.4 (At3g27690) promoter. May act as transcriptional repressor in light-regulated expression of LHCB2.4. Binds DNA as monomer. DNA-binding activity is redox-dependent (PubMed:22718771). {ECO:0000269|PubMed:18315949, ECO:0000269|PubMed:22718771, ECO:0000305|PubMed:18315949}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.08G265600.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAF3697900.0AF369790.1 Phaseolus vulgaris bZIP transcription factor 2 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006585866.10.0bZIP transcription factor 16 isoform X1
RefseqXP_028245300.10.0bZIP transcription factor 16-like isoform X1
RefseqXP_028245301.10.0bZIP transcription factor 16-like isoform X1
RefseqXP_028245302.10.0bZIP transcription factor 16-like isoform X1
SwissprotQ501B21e-157BZP16_ARATH; bZIP transcription factor 16
TrEMBLA0A445JKR10.0A0A445JKR1_GLYSO; BZIP transcription factor 16 isoform A
TrEMBLI1KWX80.0I1KWX8_SOYBN; Uncharacterized protein
STRINGGLYMA08G34280.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF40173256
Representative plantOGRP7001767
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.11e-156basic region/leucine zipper transcription factor 16
Publications ? help Back to Top
  1. Liao Y, et al.
    Soybean GmbZIP44, GmbZIP62 and GmbZIP78 genes function as negative regulator of ABA signaling and confer salt and freezing tolerance in transgenic Arabidopsis.
    Planta, 2008. 228(2): p. 225-40
    [PMID:18365246]
  2. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]