PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.07G153600.1.p
Common NameGLYMA_07G153600
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 177aa    MW: 19710 Da    PI: 6.907
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.07G153600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.94.9e-105293955
                         HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH  9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                          r RR+ri ++f  L++++P        K++ +++Le A++Y+k Lq
  Glyma.07G153600.1.p 52 ARERRHRISDRFKILQSMVPGG-----SKMDTVSMLECAIHYVKFLQ 93
                         699*****************95.....5******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.9324392IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.23E-1348107IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.29E-134996No hitNo description
SMARTSM003532.6E-124998IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.5E-114996IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.9E-75293IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    Send to blast
MECINNPTSC EGSSSSSKHP NKSNREKKGV RKSNKGGGGG VRLSTDPQSV AARERRHRIS  60
DRFKILQSMV PGGSKMDTVS MLECAIHYVK FLQTEILLHQ ALIDFVDVDH HESPLFLPAE  120
YNNFPDEHSN ISLQQNPSSV SVHSHHHQQS LPQLPLSQCY FQGEEDFNTF DAIMPP*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007140229.15e-73hypothetical protein PHAVU_008G095100g
TrEMBLK7L1X01e-130K7L1X0_SOYBN; Uncharacterized protein
STRINGGLYMA07G18651.11e-129(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF71672846
Representative plantOGRP89411014
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G01310.12e-28APRATAXIN-like