PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.07G106800.1.p
Common NameGLYMA_07G106800, LOC100796973
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family G2-like
Protein Properties Length: 417aa    MW: 46381.1 Da    PI: 7.1507
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.07G106800.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like1001.6e-31239292255
              G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                          pr+rWt+ LH+rF++ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+
  Glyma.07G106800.1.p 239 PRMRWTSSLHNRFLHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 292
                          9****************************************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.04E-15236293IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.603.3E-28237293IPR009057Homeodomain-like
TIGRFAMsTIGR015574.8E-24239292IPR006447Myb domain, plants
PfamPF002493.4E-7240291IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 417 aa     Download sequence    Send to blast
MPQNKIFQDQ QQSSNPIPDL SLHISLPNSA PSSICSEGDS PFDAEGLKSH SDGSIKGSSS  60
PYYHIDTQLS LANHTSTIST PSEAESTWRK RNFVRLCHGV SHEGQIRLIN GIPLYSNLSS  120
LDNTSSTINI PSIERNQLPT NKFSFSSLYA LPHPPSAPNY GNNNGVVFGG VAVEPISRFR  180
EMTMESALRP QQVPYFDYPH QQQHQFGSSN IGASDFSNGF VRSRMFSRQQ SNKRNMRAPR  240
MRWTSSLHNR FLHAVELLGG HERATPKSVL ELMDVKDLTL AHVKSHLQMY RTVKNTDKPA  300
ASSDGDEDFM SLTVPNDQNK NFLPNQRGTP NASIDNDMGY TSSNLWVNSS SSRGARIQAN  360
SRDLDELSPQ EILSSQHTGK LSEGSNYIQT RSFDMDQNPS LEFTLGRSNW HNNEHA*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A4e-17240294458Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B4e-17240294458Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A4e-17240294357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B4e-17240294357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C4e-17240294357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D4e-17240294357Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A4e-17240294458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C4e-17240294458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D4e-17240294458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F4e-17240294458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H4e-17240294458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J4e-17240294458Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.291750.0root| stem
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.07G106800.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003530084.10.0transcription repressor KAN1 isoform X1
RefseqXP_028239985.10.0transcription repressor KAN1-like isoform X1
TrEMBLA0A0B2QYK30.0A0A0B2QYK3_GLYSO; Transcription repressor KAN1
TrEMBLI1KJ970.0I1KJ97_SOYBN; Uncharacterized protein
STRINGGLYMA07G12070.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF17563391
Representative plantOGRP5701580
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G16560.11e-44G2-like family protein