PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gh_D12G2800
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family EIL
Protein Properties Length: 121aa    MW: 14486.7 Da    PI: 4.5156
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gh_D12G2800genomeNAU-NBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN371.13e-2248109167
                  XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
         EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevc 67 
                  +el++rmw+d+m+lkrlke++k     ke  ++ +k++ s+eqarrkkmsra DgiLkYMlk+mev 
  Gh_D12G2800  48 DELERRMWRDKMRLKRLKEQNKC----KEG-IDIAKQRLSQEQARRKKMSRAEDGILKYMLKMMEVF 109
                  79*****************9996....788.**********************************96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048732.4E-1648110No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 121 aa     Download sequence    Send to blast
MMMFDEMGIC GDMDFFSAPL GEKDVAASQI EPEATVEDDY SDEEIDVDEL ERRMWRDKMR  60
LKRLKEQNKC KEGIDIAKQR LSQEQARRKK MSRAEDGILK YMLKMMEVFD DEKLYNIWIR  120
M
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ghi.64131e-106boll| embryo| ovule| root| stem
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ5253173e-99HQ525317.1 Gossypium herbaceum clone NBRI_B2_520 simple sequence repeat marker, mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012486038.11e-73PREDICTED: protein ETHYLENE INSENSITIVE 3-like
SwissprotO246068e-50EIN3_ARATH; Protein ETHYLENE INSENSITIVE 3
TrEMBLA0A0D2M0C75e-78A0A0D2M0C7_G
STRINGPOPTR_0004s20830.18e-56(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM2882623
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20770.14e-51EIL family protein