PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

Plant Transcription Factor Database

v4.0

Previous version: v1.0, v2.0, v3.0

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Gh_D11G2965

Organism

Gossypium hirsutum

Taxonomic ID

3635

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium

Family

BES1

Protein Properties

Length: 317aa MW: 34075 Da PI: 8.2219

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Gh_D11G2965	genome	NAU-NBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	201.1	3.4e-62	2	119	1	118
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslqssl 98 ++++r+ptwkErEnnkrRERrRRaiaaki+aGLR++Gnyklpk++DnneVlkALc+eAGw+ve+DGttyrkg+kple+++++g sa+asp+ss++ s+ Gh_D11G2965 2 TSGTRMPTWKERENNKRRERRRRAIAAKIFAGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKGCKPLERMDIVGGSATASPSSSYHPSP 99 5899*****************************************************************************************99888 PP DUF822 99 kssalaspvesysaspksss 118 ss+++s ++s+ + ++ + Gh_D11G2965 100 MSSSFPSSASSSYVVNSNGD 119 88888777766555444333 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	2.4E-56	3	131	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Sequence ? help Back to Top
Protein Sequence Length: 317 aa Download sequence Send to blast
MTSGTRMPTW KERENNKRRE RRRRAIAAKI FAGLRMYGNY KLPKHCDNNE VLKALCNEAG 60 WTVEPDGTTY RKGCKPLERM DIVGGSATAS PSSSYHPSPM SSSFPSSASS SYVVNSNGDG 120 SSLIPWLKNL SSASSSPMSS KLPHIYIHSG SISAPVTPPL SSPTARTPRT NTDWEDLTAR 180 PGWSAQQHSF LPSSTPPSPG RQIVPDPEWF AGLRIPLSGP TSPTFSLVSS NPFGFKEEVL 240 AGGGSRMWTP GQSGTCSPAI AAGSDHTADV PMSEVISDEF AFGSNATGLV KPWEGERIHE 300 DCGSDDLELT LGSSRTR

Expression -- UniGene ? help Back to Top
UniGene ID	E-value	Expressed in
Ghi.20003	0.0	boll\| ovule

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012434546.1	0.0	PREDICTED: BES1/BZR1 homolog protein 4-like
Swissprot	Q9ZV88	1e-136	BEH4_ARATH; BES1/BZR1 homolog protein 4
TrEMBL	A0A0D2SUL4	0.0	A0A0D2SUL4_G
STRING	VIT_19s0014g00870.t01	1e-164	(Vitis vinifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Malvids	OGEM1917	27	81

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78700.1	1e-119	BES1/BZR1 homolog 4