PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gh_D06G2159
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family VOZ
Protein Properties Length: 101aa    MW: 11646.3 Da    PI: 9.4132
Description VOZ family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gh_D06G2159genomeNAU-NBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1VOZ101.11.4e-312289138205
          VOZ 138 hesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklvdekksakgkvskdsl 205
                    srkqvm+ef+glkrsyymdpq ++ f+wh yeyein++da+alyrle klvd+kksakg  ++d+ 
  Gh_D06G2159  22 CMSRKQVMNEFEGLKRSYYMDPQTLNRFKWHYYEYEINKCDACALYRLESKLVDGKKSAKGISANDTD 89 
                  569**********************************************************8888765 PP

Sequence ? help Back to Top
Protein Sequence    Length: 101 aa     Download sequence    Send to blast
MNLVRKREQK TGLSQITTAV VCMSRKQVMN EFEGLKRSYY MDPQTLNRFK WHYYEYEINK  60
CDACALYRLE SKLVDGKKSA KGISANDTDT DGKTHGGVPM Q
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ghi.34874e-56boll| ovule
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Ubiquitous. Expressed in the vascular bundles of various tissues, specifically in the phloem. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}.
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By far-red light. {ECO:0000269|PubMed:22904146}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012444209.19e-34PREDICTED: transcription factor VOZ1-like isoform X1
RefseqXP_012444210.19e-34PREDICTED: transcription factor VOZ1-like isoform X1
RefseqXP_012444211.19e-34PREDICTED: transcription factor VOZ1-like isoform X1
RefseqXP_012444212.19e-34PREDICTED: transcription factor VOZ1-like isoform X2
RefseqXP_012444213.19e-34PREDICTED: transcription factor VOZ1-like isoform X2
RefseqXP_016730807.19e-34PREDICTED: transcription factor VOZ1
RefseqXP_016730808.19e-34PREDICTED: transcription factor VOZ1
RefseqXP_016730809.19e-34PREDICTED: transcription factor VOZ1
SwissprotQ9SGQ03e-30VOZ1_ARATH; Transcription factor VOZ1
TrEMBLA0A0D2V9E42e-68A0A0D2V9E4_GOSRA; Uncharacterized protein
STRINGGorai.010G243300.14e-69(Gossypium raimondii)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28520.21e-32vascular plant one zinc finger protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Yasui Y,Kohchi T
    VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis.
    Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5
    [PMID:25351333]
  3. Kumar S,Choudhary P,Gupta M,Nath U
    VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition.
    Plant Physiol., 2018. 176(4): p. 2917-2930
    [PMID:29507119]
  4. Song C,Lee J,Kim T,Hong JC,Lim CO
    VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis.
    Planta, 2018. 247(6): p. 1439-1448
    [PMID:29536220]