PlantTFDB
Plant Transcription Factor Database
v5.0
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gh_D02G0824
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family bZIP
Protein Properties Length: 338aa    MW: 38304.9 Da    PI: 6.2449
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gh_D02G0824genomeNAU-NBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.83.5e-1163101442
                  XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeN 42 
                  +k +rr+++NReAAr+sR+RKka++++Le    +L +  
  Gh_D02G0824  63 DKTQRRLAQNREAARKSRLRKKAYVQQLESSRLQLAQLE 101
                  799**************************8665555544 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1705.0E-855107No hitNo description
SMARTSM003381.2E-660120IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.16362106IPR004827Basic-leucine zipper domain
PfamPF001703.7E-863104IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.69E-764107No hitNo description
CDDcd147088.94E-2264116No hitNo description
PROSITE patternPS0003606782IPR004827Basic-leucine zipper domain
PfamPF141441.4E-27151226IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    Send to blast
MTIYEQLNQI SRWGDSFNRG DSPNTGSSTI VEGDVRLENK AGYISCDQVE PSRSDQETNK  60
PIDKTQRRLA QNREAARKSR LRKKAYVQQL ESSRLQLAQL EQELERTRQQ GIYISSPSDT  120
GYFGLPGTVN SGITAFEMEY GHWVEVQNKQ TCELRSALQA HITDIELQIL VEHGLNHYCN  180
LFRMKADAAK ADVFYLSSGI WRTSAERFFH WIGGFRPSEL SNVVMSHIEP LTDQQQLEVC  240
NLRQSSQQAE DALSQGIDKL QQNFSCSVAS DLSWGHYRAQ MAAATDIIEA LEGFVNQADH  300
LREQTLLQMV RILTTHQAAR GLLALGDYFN RLRALSSL
Expression -- Microarray ? help Back to Top
Source ID E-value
GEO1098738720.0
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1 (By similarity). {ECO:0000250, ECO:0000269|PubMed:12953119}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016693953.10.0PREDICTED: transcription factor TGA3-like isoform X1
RefseqXP_016693954.10.0PREDICTED: transcription factor TGA3-like isoform X1
RefseqXP_016693955.10.0PREDICTED: transcription factor TGA3-like isoform X1
SwissprotQ93ZE21e-143TGA7_ARATH; Transcription factor TGA7
TrEMBLA0A1U8JUN50.0A0A1U8JUN5_GOSHI; transcription factor TGA3-like isoform X1
STRINGGorai.005G092400.10.0(Gossypium raimondii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM30612766
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77920.11e-130bZIP family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]