PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gh_A07G0954
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family GeBP
Protein Properties Length: 204aa    MW: 23353.1 Da    PI: 10.9898
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gh_A07G0954genomeNAU-NBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57354.43.6e-1714103498
       DUF573   4 qrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWgs 98 
                  +r++se+Dei +L+ li  +++     +   +  ++ + k+++ +++ sq+++KirrL++K +++ ++        ++++hd+ if+lsk+iWg+
  Gh_A07G0954  14 SRVFSESDEIQILKCLIRATKSIPPPITTVGTSTINRIIKRLDHRFTVSQITDKIRRLRDKHHNHARN-----RALVRNHHDRRIFKLSKRIWGK 103
                  69***************997777755555667788999999***********************9999.....778999**************95 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045044.7E-1714102IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    Send to blast
MSTTPPSTAP NGRSRVFSES DEIQILKCLI RATKSIPPPI TTVGTSTINR IIKRLDHRFT  60
VSQITDKIRR LRDKHHNHAR NRALVRNHHD RRIFKLSKRI WGKKATPRKK NNKSEDQGAI  120
EVGGDGVEKL DKFPYLVAEF SKVLPENEVW KQKMKRVGEE KLRKMDQEWV MLKVEEAKLV  180
AKKAELIQLQ IMEVMGGNGS ANGV
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ghi.44990.0boll| ovule
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016696866.11e-149PREDICTED: uncharacterized protein LOC107912982
TrEMBLA0A1U8K2V01e-148A0A1U8K2V0_GOSHI; uncharacterized protein LOC107912982
STRINGGorai.001G117300.11e-145(Gossypium raimondii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM17149810
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61730.16e-11DNA-binding storekeeper protein-related transcriptional regulator