PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gh_A06G1990
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family BES1
Protein Properties Length: 322aa    MW: 34594.3 Da    PI: 7.7638
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gh_A06G1990genomeNAU-NBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822211.91.6e-6521471150
       DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslqssl 98 
                  ++++r+ptwkErEnnkrRERrRRaiaaki+aGLR++Gnyklpk++DnneVlkALc eAGw+ve+DGtty+kg+kp +++++ g sasasp+ss++   
  Gh_A06G1990   2 TSGTRMPTWKERENNKRRERRRRAIAAKIFAGLRMYGNYKLPKHCDNNEVLKALCDEAGWTVEEDGTTYKKGCKPVDRMDILGGSASASPCSSYH--- 96 
                  5899*******************************************************************************************... PP

       DUF822  99 kssalaspvesysaspksssfpspssldsislasa....asllpvlsvlslvsssl 150
                       +sp++sy++sp sssfpsp+s+    + +     +sl+p+l++ls+ sss+
  Gh_A06G1990  97 -----PSPCASYNPSPGSSSFPSPASSHYQANGNGnadaNSLIPWLKNLSSGSSSA 147
                  .....******************9886655443335677**********9977664 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056871.5E-663141IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    Send to blast
MTSGTRMPTW KERENNKRRE RRRRAIAAKI FAGLRMYGNY KLPKHCDNNE VLKALCDEAG  60
WTVEEDGTTY KKGCKPVDRM DILGGSASAS PCSSYHPSPC ASYNPSPGSS SFPSPASSHY  120
QANGNGNADA NSLIPWLKNL SSGSSSASSK LAHHLYFAGG SISAPVTPPL SSPTSRTPRA  180
RNDWDETTGG SARTGQRHCY LPSSTPPSPN HQVFPDPEWL SSGPTSPTFS LVSRNPFGFK  240
DEALSAGGSR MWTPGQSGTC SPAFPAGVDQ TSDVPMSDVI AAEFAFGNNF TGLVKPWEGE  300
KIHEECVADD DLELTLGNSK TR
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ghi.21380.0boll| ovule| root
Expression -- Microarray ? help Back to Top
Source ID E-value
GEO783472510.0
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012449695.10.0PREDICTED: BES1/BZR1 homolog protein 4-like
SwissprotQ9ZV881e-132BEH4_ARATH; BES1/BZR1 homolog protein 4
TrEMBLA0A0B0P1230.0A0A0B0P123_G
STRINGVIT_10s0003g01790.t011e-148(Vitis vinifera)
STRINGPOPTR_0004s06100.11e-148(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM19172781
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.11e-105BES1/BZR1 homolog 4