PlantTFDB
Plant Transcription Factor Database
PlantRegMap/PlantTFDB v5.0
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gh_A06G0329
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family bZIP
Protein Properties Length: 357aa    MW: 40557.6 Da    PI: 7.6901
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gh_A06G0329genomeNAU-NBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_137.17.1e-1273112342
                  XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeN 42 
                   +k +rr+++NReAAr+sR+RKka++++Le    +L +  
  Gh_A06G0329  73 TDKIQRRLAQNREAARKSRLRKKAYVQQLESSHLKLAQLE 112
                  7899**************************8554444433 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.8E-871134IPR004827Basic-leucine zipper domain
PfamPF001702.7E-873113IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.07173117IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.9E-775117No hitNo description
Gene3DG3DSA:1.20.5.1703.1E-876119No hitNo description
PROSITE patternPS0003607893IPR004827Basic-leucine zipper domain
PfamPF141446.3E-29161236IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0042742Biological Processdefense response to bacterium
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 357 aa     Download sequence    Send to blast
MSSLSTELTR RMAIYEQFQQ INKWGDTFNG EDSPKTGSST VLQVDVRLEN KAEYISSEKT  60
EPSRSDQETN KPTDKIQRRL AQNREAARKS RLRKKAYVQQ LESSHLKLAQ LEQELERARQ  120
QGLYISSAST GYFGLSAAAN AGITAFEMEY GNWVEEQNKK ICELRSALQA HITDIELRIL  180
VENSLNHYCN LFHIKADAAK ADVFYLISGI WRTTAERFFH WIGGFRPSEL LNVLMSQIEP  240
LTDQQQLEVY NLQQSSQQAE DALSQGIDRL QQNLAESVAT DLSSGNYKAQ LAAAIDKLQA  300
LEGFVKQADH LRQQTLQQMA RILTTRQAAR GLLALGEYFH RLRALSSLWS ARPREPS
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ghi.44230.0boll
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1 (By similarity). {ECO:0000250, ECO:0000269|PubMed:12953119}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00247DAPTransfer from AT1G77920Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016754359.10.0PREDICTED: transcription factor TGA7
RefseqXP_016754360.10.0PREDICTED: transcription factor TGA7
SwissprotQ93ZE21e-164TGA7_ARATH; Transcription factor TGA7
TrEMBLA0A1U8PT830.0A0A1U8PT83_GOSHI; transcription factor TGA7
STRINGGorai.010G045700.10.0(Gossypium raimondii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM30612766
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77920.11e-156bZIP family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]