PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS72921.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family GeBP
Protein Properties Length: 324aa    MW: 36763.3 Da    PI: 9.7203
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS72921.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF5731154.5e-369110197
      DUF573   1 klfqrlwseeDeivlLqGlidfkakt.gk....spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskk 94 
                 klfqrlw++eDei lLqG++d+++++ g     + ++d++afy+++k + +++++k+qlveK+rrLKkK+++ v+k++sgk+ +f+++hdq +fe+s+k
  EPS72921.1   9 KLFQRLWTDEDEIELLQGFLDYTTQRrGLysssQHHHDTSAFYDQIKCRFQLDFNKNQLVEKLRRLKKKYRNVVSKISSGKDYNFKSPHDQATFEISSK 107
                 579*******************776516586644556************************************************************** PP

      DUF573  95 iWg 97 
                 iWg
  EPS72921.1 108 IWG 110
                 **8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045045.6E-3411110IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    Send to blast
KKPADESRKL FQRLWTDEDE IELLQGFLDY TTQRRGLYSS SQHHHDTSAF YDQIKCRFQL  60
DFNKNQLVEK LRRLKKKYRN VVSKISSGKD YNFKSPHDQA TFEISSKIWG NVNGSSAPFR  120
SPAVPIDEDD DDLNNPAFVS IQSPIPSAFD PNTSSKTPRP RKRNRPGSAV KLEEKQHQHQ  180
QQHHHHHHHP LFGHINNIPV QPQPQPQPQP QPPTVRPIAA APVLSMGISG VLSNVIEETV  240
KNSLSPVLKE LSSGSSNLLF ANGILSGSHS PLSLCFPGSM AGDKTSDDRW RKQQIMELEV  300
FSKRLELVQD HIRVQLQELR SMGN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020552957.11e-128probable transcription factor At3g04930
TrEMBLS8D6980.0S8D698_9LAMI; Uncharacterized protein (Fragment)
STRINGMigut.N01941.1.p1e-112(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA40522445
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28040.18e-63DNA-binding storekeeper protein-related transcriptional regulator
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]