PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS71573.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family bZIP
Protein Properties Length: 690aa    MW: 76312 Da    PI: 9.2238
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS71573.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1331.3e-10385420439
                 XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLe 39 
                  k  rr+++NReAAr+sR+RKka++++Le+    L+
  EPS71573.1 385 AKTLRRLAQNREAARKSRLRKKAYVQQLETSRIRLT 420
                 5889*************************8655555 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF547687.86E-222291No hitNo description
PROSITE profilePS5013714.1022392IPR014720Double-stranded RNA-binding domain
SMARTSM003581.2E-162491IPR014720Double-stranded RNA-binding domain
Gene3DG3DSA:3.30.160.201.9E-222490IPR014720Double-stranded RNA-binding domain
CDDcd000484.76E-172490No hitNo description
PfamPF000354.4E-142588IPR014720Double-stranded RNA-binding domain
PROSITE profilePS501378.882108178IPR014720Double-stranded RNA-binding domain
SMARTSM003581.6E-8109177IPR014720Double-stranded RNA-binding domain
PfamPF000357.2E-11110173IPR014720Double-stranded RNA-binding domain
SuperFamilySSF547681.52E-12110179No hitNo description
Gene3DG3DSA:3.30.160.205.7E-12110177IPR014720Double-stranded RNA-binding domain
CDDcd000481.61E-12110176No hitNo description
SMARTSM003388.2E-5382447IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.979384428IPR004827Basic-leucine zipper domain
PfamPF001708.2E-8385426IPR004827Basic-leucine zipper domain
CDDcd147087.59E-21386436No hitNo description
SuperFamilySSF579599.38E-7386428No hitNo description
Gene3DG3DSA:1.20.5.1702.0E-7387429No hitNo description
PROSITE patternPS000360389404IPR004827Basic-leucine zipper domain
PfamPF141443.8E-32467542IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 690 aa     Download sequence    Send to blast
MGDFTGQLEA LLEWKLLGLK CYVFKSRLQE YCQKAGVTAP VYETIKQGPS HEPIFRSSVT  60
VGDTTFDSLP GFFNRKAAEQ SAAEVALMEL AKSSDLLEKS QPVQESGLCK NLMQEYAQKM  120
NYAAPLYECH RDEKPSNRTP MHYCIVDIGG IKYIGASAKT KKQAEIKAAR TALIAIQSAS  180
SPDSANSAYT VVPLKRPASS DLGINSNETA PPALKPKRKR FKKFRSNRRG KKKSSSSEQS  240
AAADIGTDTT MVQSYKNNAA AKMDDAYNSC AADLQDKINA LYDGTTTNRP TTSAAATLEM  300
FPSWPGRGSS RSGEEESTDS AASGLNNTSP ITTKLLASGH HTAAALHHIH HRPVMEDTGG  360
FQTPANYNAE KRRGPGANSD RILDAKTLRR LAQNREAARK SRLRKKAYVQ QLETSRIRLT  420
QLEQDLHRAR SQGVYLEGGG SANGNISSGG TMFDIEYARW LEDDHRHITE LRAALQTHLS  480
DGDLRVIVDG YISHYDEIFR LKGVAAKSDV FHLITGMWTT PAERCFLWMG GFRPSDLIKM  540
LMAQLDPLTE QQVVGIYGLQ QSTQQAEEAL SQGMEQLQQS LIETISNGSI NGSMHQMAIA  600
LNQLANLEGF VKQADNLRQQ TLHQLRRILT VRQAARCFLA IGEYKGRLRA LSSLWASRPR  660
ETLTGDENHP YQTTPEFQIV SQNPLSNNNF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2l2n_A5e-312110716103Hyponastic leave 1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1215222PKRKRFKK
Functional Description ? help Back to Top
Source Description
UniProtTogether with TGA10, basic leucine-zipper transcription factor required for anther development, probably via the activation of SPL expression in anthers and via the regulation of genes with functions in early and middle tapetal development (PubMed:20805327). Required for signaling responses to pathogen-associated molecular patterns (PAMPs) such as flg22 that involves chloroplastic reactive oxygen species (ROS) production and subsequent expression of H(2)O(2)-responsive genes (PubMed:27717447). {ECO:0000269|PubMed:20805327, ECO:0000269|PubMed:27717447}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00131DAPTransfer from AT1G08320Download
Motif logo
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by flg22 in leaves. {ECO:0000269|PubMed:27717447}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011088884.10.0transcription factor TGA9 isoform X2
RefseqXP_020552198.10.0transcription factor TGA9 isoform X1
SwissprotQ93XM61e-163TGA9_ARATH; Transcription factor TGA9
TrEMBLS8E6U80.0S8E6U8_9LAMI; Uncharacterized protein
STRINGXP_006424250.10.0(Citrus clementina)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA36832340
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08320.21e-155bZIP family protein
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]
  2. Gutsche N,Zachgo S
    The N-Terminus of the Floral Arabidopsis TGA Transcription Factor PERIANTHIA Mediates Redox-Sensitive DNA-Binding.
    PLoS ONE, 2016. 11(4): p. e0153810
    [PMID:27128442]
  3. Noshi M,Mori D,Tanabe N,Maruta T,Shigeoka S
    Arabidopsis clade IV TGA transcription factors, TGA10 and TGA9, are involved in ROS-mediated responses to bacterial PAMP flg22.
    Plant Sci., 2016. 252: p. 12-21
    [PMID:27717447]
  4. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]