PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS70041.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family AP2
Protein Properties Length: 408aa    MW: 45174.5 Da    PI: 7.0366
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS70041.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP243.86.4e-1467128155
         AP2   1 sgykGVrwdkkrgrWvAeIrd.pseng......krkrfslgkfgtaeeAakaaiaarkkleg 55 
                 s y+GV++++++gr++A+++d  ++n       k+   slg ++ +e Aa+a++ a++k++g
  EPS70041.1  67 SIYRGVTRHRWTGRYEAHLWDkSTWNEsqnkkgKQELCSLGAYDDEEAAARAYDLAALKYWG 128
                 57*******************7666444445655599***********************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008476.0E-1167128IPR001471AP2/ERF domain
SuperFamilySSF541712.42E-1467137IPR016177DNA-binding domain
PROSITE profilePS5103217.76768136IPR001471AP2/ERF domain
SMARTSM003805.0E-1968142IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.1E-1368137IPR001471AP2/ERF domain
PRINTSPR003674.4E-56980IPR001471AP2/ERF domain
PRINTSPR003674.4E-5118138IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 408 aa     Download sequence    Send to blast
MAMSSSEMAF RAEESVGGES SEATEPHPGS DQLRLFRGIK KARKERGCTA KDRISKMPPS  60
TAGKRSSIYR GVTRHRWTGR YEAHLWDKST WNESQNKKGK QELCSLGAYD DEEAAARAYD  120
LAALKYWGSG TQINFPVKDY ARDLGEMQNV TREDYLASLR RKSSGFSKGI SKYRPFSRWD  180
LSPLSSQAQG LDNINSGFYG DEMATVHEYA VGLSSDRKID LSNYIKWWSP NGSIQSDVPS  240
KALYDETELE CPVDAASEIQ ALERSMQPTE PYEMPRLGFP LETIKHKRVS AMSALMKSAA  300
YIRLKQKISK SSEKDESKSK PNIDKLELES SAAGQSCQAD GSAYEVGGLD MQSTASPLAS  360
LLSAPFVMID PISDPAVWSS LMPVLSPGSS SRSNNVIKTE STSDYTFF
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011096749.11e-159AP2-like ethylene-responsive transcription factor At2g41710 isoform X2
SwissprotQ8GWK21e-104AP2L4_ARATH; AP2-like ethylene-responsive transcription factor At2g41710
TrEMBLS8CYE80.0S8CYE8_9LAMI; Uncharacterized protein (Fragment)
STRINGMigut.M01946.1.p1e-153(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA107341921
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41710.11e-90AP2 family protein
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]