PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS69080.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family G2-like
Protein Properties Length: 193aa    MW: 21299.2 Da    PI: 6.5136
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS69080.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like108.82.8e-343892155
     G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                kprlrWt eLH+rFv+av+qLGG+ekAtPkti+++m+vkgLtl+h+kSHLQkYR+
  EPS69080.1 38 KPRLRWTAELHDRFVDAVAQLGGPEKATPKTIMRTMGVKGLTLYHLKSHLQKYRM 92
                79****************************************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129411.73595IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.1E-323693IPR009057Homeodomain-like
SuperFamilySSF466896.09E-173892IPR009057Homeodomain-like
TIGRFAMsTIGR015572.4E-243892IPR006447Myb domain, plants
PfamPF002491.9E-94091IPR001005SANT/Myb domain
PfamPF143791.1E-22126171IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010628Biological Processpositive regulation of gene expression
GO:0016036Biological Processcellular response to phosphate starvation
GO:0005634Cellular Componentnucleus
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    Send to blast
MYSALAIQDL AAEANGGLLD GTNLPGDGCL VLTSSDPKPR LRWTAELHDR FVDAVAQLGG  60
PEKATPKTIM RTMGVKGLTL YHLKSHLQKY RMGRQASKEL TESSKEESHD AGGLSSADAL  120
LNDGYQVTEA LRAQMEVQRR LHQQLQVQRH LDIRLDAQGR YLQSILENAC KLMEDQSALV  180
DVTRNDFSAL AII
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4r_A1e-203894157Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B1e-203894157Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C1e-203894157Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D1e-203894157Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator (PubMed:26586833). Acts redundantly with PHR1 as a key component of the central regulatory system controlling transcriptional responses to Pi starvation (PubMed:26586833). Binds in a sequence-specific manner to phosphate starvation-regulated promoters (PubMed:26586833). {ECO:0000269|PubMed:26586833}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00378DAPTransfer from AT3G24120Download
Motif logo
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Up-regulated in roots by low Pi. {ECO:0000269|PubMed:26586833}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011091432.11e-92protein PHR1-LIKE 2 isoform X2
SwissprotQ94A577e-85PHL2_ARATH; Protein PHR1-LIKE 2
TrEMBLS8CQP61e-139S8CQP6_9LAMI; Uncharacterized protein (Fragment)
STRINGXP_002518104.14e-84(Ricinus communis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA37912344
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24120.12e-68G2-like family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]