PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS68274.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family bHLH
Protein Properties Length: 175aa    MW: 19871 Da    PI: 9.7451
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS68274.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.41.6e-10651555
                HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                h ++Er+ R+++ ++f  L +++P +     kKl+K+++L  A++Y+k Lq
  EPS68274.1  6 HIIAERKCREQLGQCFLALSTIVPGL-----KKLDKSSVLGDAIKYMKFLQ 51
                899***********************.....9******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.043150IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474599.03E-15466IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000838.76E-9655No hitNo description
Gene3DG3DSA:4.10.280.104.5E-14660IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.0E-8651IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.6E-10756IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 175 aa     Download sequence    Send to blast
SQTYDHIIAE RKCREQLGQC FLALSTIVPG LKKLDKSSVL GDAIKYMKFL QEKVKLLEEH  60
ATKKSFESVI LLKKNNPTPA DGNEFRVSNS PEERSLPEIE ARSHNSQILI KIHCAHHRGI  120
LANIIYNVEK LNLRILNTST TSFARISLHV TLHAEMEKEF NSTVKEVVVR IRAAL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011073652.11e-67transcription factor bHLH18-like
TrEMBLS8CM851e-124S8CM85_9LAMI; Uncharacterized protein (Fragment)
STRINGAquca_010_00012.13e-52(Aquilegia coerulea)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA17602461
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.12e-43bHLH family protein
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]