PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS66831.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family WRKY
Protein Properties Length: 321aa    MW: 34896.6 Da    PI: 10.4025
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS66831.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY99.42.2e-31240297359
                 -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 D+y+WrKYGqK++kgs++pr+YY+C++  gCp++k+ver+++dp ++++tYegeH+h 
  EPS66831.1 240 DEYSWRKYGQKPIKGSPYPRGYYKCSTVrGCPARKHVERANDDPMMLIVTYEGEHQHA 297
                 9************************9888****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF105331.2E-14191236IPR018872Zn-cluster domain
Gene3DG3DSA:2.20.25.801.1E-32226297IPR003657WRKY domain
PROSITE profilePS5081130.481233299IPR003657WRKY domain
SuperFamilySSF1182901.57E-26236297IPR003657WRKY domain
SMARTSM007747.7E-38238298IPR003657WRKY domain
PfamPF031066.6E-27240296IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    Send to blast
MAVEFMRYEN LNEMQEAAKA GLMSMEHLIR SVSSRNQHLD CREVTDFTVS KFKKVISILN  60
RRGHARFRRA PIQQPPPPPL NSPSPVSASV VNRQQSLSLF SVSPAASQPL TLDFTKPGGG  120
FSKDVTEMKG KDVLTLSTAV STSGNSSSTF ISSITGEGSV SNGKGSGGSP SIFLQASAPV  180
APAVKPSLSG KRCREGDHSD YISGKASHSA RCHCKRKKSK VKRTFRVPAI SSKIADIPPD  240
EYSWRKYGQK PIKGSPYPRG YYKCSTVRGC PARKHVERAN DDPMMLIVTY EGEHQHAQGS  300
INRFPDAAGV PPSQLVVFES S
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A8e-22226296271WRKY transcription factor 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011082056.11e-148PREDICTED: probable WRKY transcription factor 17
SwissprotQ9SV152e-99WRK11_ARATH; Probable WRKY transcription factor 11
TrEMBLS8CPV60.0S8CPV6_9LAMI; Uncharacterized protein
STRINGVIT_04s0069g00920.t011e-109(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA31452250
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31550.22e-86WRKY DNA-binding protein 11
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]