PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS63866.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family WRKY
Protein Properties Length: 179aa    MW: 19609.3 Da    PI: 10.4743
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS63866.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY101.74.2e-32107164359
                 -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 D ++WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+++dp+++++tYegeHnh+
  EPS63866.1 107 DDFSWRKYGQKPIKGSPHPRGYYKCSSIrGCPARKHVERATDDPSMLIVTYEGEHNHS 164
                 99***********************9988****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF105333.1E-1757103IPR018872Zn-cluster domain
Gene3DG3DSA:2.20.25.804.0E-3493165IPR003657WRKY domain
PROSITE profilePS5081130.871100166IPR003657WRKY domain
SuperFamilySSF1182901.15E-27102164IPR003657WRKY domain
SMARTSM007744.1E-38105165IPR003657WRKY domain
PfamPF031066.1E-28107163IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    Send to blast
ERKESTTTIN FASPATSFRS SLTADTESLQ PSMSSGFQIT NLSHSAGRPP ISKSIFKRKC  60
NSMDDAGGKC GGGGSSRCHC PKKRKTRLKR VVRVPAISMK MADIPPDDFS WRKYGQKPIK  120
GSPHPRGYYK CSSIRGCPAR KHVERATDDP SMLIVTYEGE HNHSALSKNE SPPLVLQSA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A1e-2293163271WRKY transcription factor 1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16673GGKCGGGG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011074403.11e-107PREDICTED: probable WRKY transcription factor 7
SwissprotQ9STX01e-67WRKY7_ARATH; Probable WRKY transcription factor 7
TrEMBLS8CH621e-131S8CH62_9LAMI; Uncharacterized protein (Fragment)
STRINGPGSC0003DMT4000205175e-96(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12202479
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24240.14e-59WRKY DNA-binding protein 7
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]