PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS63781.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family bZIP
Protein Properties Length: 357aa    MW: 40852.2 Da    PI: 7.9056
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS63781.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_136.79.4e-1270106238
                 XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeL 38 
                 k++k++rr+++NReAAr+sR+RKka++++Le+  + L
  EPS63781.1  70 KPDKVQRRLAQNREAARKSRLRKKAYVQKLETCKQRL 106
                 789***************************9755555 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1704.9E-868118No hitNo description
SMARTSM003381.9E-669131IPR004827Basic-leucine zipper domain
PfamPF001701.5E-870104IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.53171115IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.57E-773111No hitNo description
PROSITE patternPS0003607691IPR004827Basic-leucine zipper domain
PfamPF141441.9E-26160234IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0042742Biological Processdefense response to bacterium
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 357 aa     Download sequence    Send to blast
MNSGSTQFVP SRRMGLCDPI HQIAMWDDFK NSSYLDSPPQ IILEFDAKPE QQQSEENSHE  60
PNRYDRETTK PDKVQRRLAQ NREAARKSRL RKKAYVQKLE TCKQRLIQLE GELNQARKQG  120
FYIGDCSDNH HPTQLGTVNQ SVVIAFEKEY KKWVEVQNRH INDLRRALES DMGAMELSGL  180
ISKGMRHYSD LFTMKASVAR ADVFYLMSGL WSSSAERFFF WIGGFRPSEL LKLLGPHLEP  240
LSEQQRLEIS NLRQSCQQAE DALSQGMEKL HQIVADTISG SCLGEEGNCL QQINSAVGNL  300
ESLVRFVGQA DHLRHETLQQ ISRMLSPHQA AKGLLAFGDY FQRLQTLSSV WSTRPHQ
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1. Could also bind to the Hex-motif (5'-TGACGTGG-3') another cis-acting element found in plant histone promoters.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00642SELEXTransfer from LOC107771743Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011097615.11e-162TGACG-sequence-specific DNA-binding protein TGA-1A isoform X2
RefseqXP_011097616.11e-162TGACG-sequence-specific DNA-binding protein TGA-1A isoform X3
SwissprotQ392371e-137TGA1_ARATH; Transcription factor TGA1
TrEMBLS8CGQ70.0S8CGQ7_9LAMI; Uncharacterized protein (Fragment)
STRINGMigut.L00088.1.p1e-153(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA7802497
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65210.51e-129bZIP family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]
  3. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  4. Herrera-Vásquez A, et al.
    Transcriptional Control of Glutaredoxin GRXC9 Expression by a Salicylic Acid-Dependent and NPR1-Independent Pathway in Arabidopsis.
    Plant Mol. Biol. Rep., 2018.
    [PMID:26696694]
  5. Gutsche N,Zachgo S
    The N-Terminus of the Floral Arabidopsis TGA Transcription Factor PERIANTHIA Mediates Redox-Sensitive DNA-Binding.
    PLoS ONE, 2016. 11(4): p. e0153810
    [PMID:27128442]
  6. Sun T, et al.
    TGACG-BINDING FACTOR 1 (TGA1) and TGA4 regulate salicylic acid and pipecolic acid biosynthesis by modulating the expression of SYSTEMIC ACQUIRED RESISTANCE DEFICIENT 1 (SARD1) and CALMODULIN-BINDING PROTEIN 60g (CBP60g).
    New Phytol., 2018. 217(1): p. 344-354
    [PMID:28898429]