PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS63341.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family bZIP
Protein Properties Length: 289aa    MW: 32664.3 Da    PI: 8.788
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS63341.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_129.81.3e-09432533
                CHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLee 33
                + +rr ++NReAAr+sR RKka+++eLe+
  EPS63341.1  4 QMQRRQAQNREAARKSRMRKKAYVQELET 32
                679************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS502178.829246IPR004827Basic-leucine zipper domain
SMARTSM003380.0077363IPR004827Basic-leucine zipper domain
PfamPF001701.0E-6433IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.8E-7539No hitNo description
SuperFamilySSF579594.85E-7538No hitNo description
PROSITE patternPS000360722IPR004827Basic-leucine zipper domain
PfamPF141442.9E-2391165IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    Send to blast
ITVQMQRRQA QNREAARKSR MRKKAYVQEL ETARLKLAQL ELELERARQH GLLIAAVSTP  60
NMSMYGTVNS GISAFEMEYG QWLDEQEKKQ SELRSLLLLQ SDAADRLVVM VENVLNHYCN  120
LFRMKKDASR FDAFYLVSGA WRTSVERFFL WIGGFRPSEL ISVVKPHLGE LSDHQNARID  180
GLKGSCVQAE DALSQGIEKL QVTLSQSTAF LAAGAGNYSA ETTASAMEKL EALESFVHQA  240
DHLREQTLHQ MSRILTTQQA AKGLVAFGEY FIRLRALSVL WTARCPNNH
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1. Could also bind to the Hex-motif (5'-TGACGTGG-3') another cis-acting element found in plant histone promoters.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011097899.11e-145transcription factor TGA4 isoform X2
SwissprotQ391621e-108TGA4_ARATH; Transcription factor TGA4
TrEMBLS8CFT10.0S8CFT1_9LAMI; Uncharacterized protein (Fragment)
STRINGMigut.C00214.1.p1e-139(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA7802497
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10030.22e-85TGACG motif-binding factor 4
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]
  3. Canales J,Contreras-López O,Álvarez JM,Gutiérrez RA
    Nitrate induction of root hair density is mediated by TGA1/TGA4 and CPC transcription factors in Arabidopsis thaliana.
    Plant J., 2017. 92(2): p. 305-316
    [PMID:28771873]