PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS60392.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family WRKY
Protein Properties Length: 139aa    MW: 15822.3 Da    PI: 4.277
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS60392.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY54.52.2e-171392259
                EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY 22 rsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
                r+YYrC+s+ gCp++k+vers++dp+++++tY+++Hnh+
  EPS60392.1  1 RGYYRCSSSkGCPARKQVERSNQDPNMLIVTYTSDHNHP 39
                89*****998****************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1182904.58E-14141IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.9E-17141IPR003657WRKY domain
PfamPF031061.3E-14139IPR003657WRKY domain
SMARTSM007742.8E-11140IPR003657WRKY domain
PROSITE profilePS5081120.84141IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 139 aa     Download sequence    Send to blast
RGYYRCSSSK GCPARKQVER SNQDPNMLIV TYTSDHNHPS PAAARAQKQH EKADSLPENN  60
PDEQQQQQQQ QQLPLSSLGE LPAGDFVWFS DYEPVLEIPI FADEDRESEM RMVFTMGEED  120
ASLFGDLGEL PECSRVFDR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012848473.11e-37PREDICTED: probable WRKY transcription factor 65
TrEMBLS8DLK31e-101S8DLK3_9LAMI; Uncharacterized protein (Fragment)
STRINGVIT_10s0003g01600.t011e-34(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA64752333
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29280.13e-34WRKY DNA-binding protein 65
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]