PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS59627.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family ERF
Protein Properties Length: 96aa    MW: 11043.5 Da    PI: 9.295
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS59627.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.26.3e-161262255
         AP2  2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                +y GVr +   g+++AeIrd +     +  r +lg+++tae+Aaka+++a+ +++g
  EPS59627.1 12 RYVGVRKRN-GGKFAAEIRDiY-G---TgGRKWLGTYDTAEKAAKAYDRAAYEMRG 62
                599***888.9*********55.4...238************************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008473.1E-101262IPR001471AP2/ERF domain
PROSITE profilePS5103220.7191270IPR001471AP2/ERF domain
CDDcd000182.76E-211270No hitNo description
SMARTSM003807.2E-251275IPR001471AP2/ERF domain
SuperFamilySSF541715.1E-201371IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.103.1E-251371IPR001471AP2/ERF domain
PRINTSPR003671.7E-61324IPR001471AP2/ERF domain
PRINTSPR003671.7E-63652IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 96 aa     Download sequence    Send to blast
ERKGMGDRGE IRYVGVRKRN GGKFAAEIRD IYGTGGRKWL GTYDTAEKAA KAYDRAAYEM  60
RGRFALLNFP SDYNLPRRDA VVFEYLDDKI LEDLLD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-22129014114Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027905400.17e-29ethylene-responsive transcription factor ERF098-like
SwissprotQ9LTC56e-26ERF98_ARATH; Ethylene-responsive transcription factor ERF098
TrEMBLS8DJF31e-61S8DJF3_9LAMI; Ethylene-responsive-element-binding factor 13 (Fragment)
STRINGGLYMA15G17090.18e-27(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G04370.15e-19Ethylene-responsive element binding factor 14
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]
  2. Van den Broeck L, et al.
    From network to phenotype: the dynamic wiring of an Arabidopsis transcriptional network induced by osmotic stress.
    Mol. Syst. Biol., 2017. 13(12): p. 961
    [PMID:29269383]