PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS59065.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family ERF
Protein Properties Length: 280aa    MW: 29496.4 Da    PI: 8.7747
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS59065.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.82.3e-174797256
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                +y+GVr+++ +g+WvAeIr+p++   r r +lg+f tae+Aa+a+++a+  l+g+
  EPS59065.1 47 RYRGVRQRS-WGKWVAEIREPRK---RSRRWLGTFATAEDAARAYDRAAVVLYGH 97
                59****999.**********955...5999******************9888775 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541717.19E-2147105IPR016177DNA-binding domain
SMARTSM003808.0E-3647110IPR001471AP2/ERF domain
PfamPF008475.2E-114795IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.2E-2947106IPR001471AP2/ERF domain
PROSITE profilePS5103222.31347104IPR001471AP2/ERF domain
CDDcd000184.00E-1847105No hitNo description
PRINTSPR003673.3E-104859IPR001471AP2/ERF domain
PRINTSPR003673.3E-107086IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006970Biological Processresponse to osmotic stress
GO:0009414Biological Processresponse to water deprivation
GO:0009738Biological Processabscisic acid-activated signaling pathway
GO:0009744Biological Processresponse to sucrose
GO:0009749Biological Processresponse to glucose
GO:0010119Biological Processregulation of stomatal movement
GO:0010353Biological Processresponse to trehalose
GO:0010449Biological Processroot meristem growth
GO:0010896Biological Processregulation of triglyceride catabolic process
GO:0031930Biological Processmitochondria-nucleus signaling pathway
GO:0032880Biological Processregulation of protein localization
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0048316Biological Processseed development
GO:0048527Biological Processlateral root development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    Send to blast
MSGATAPPPP SPPPDTSPNK QQRPPHEQDA TAKRPKGKGG PDNAKFRYRG VRQRSWGKWV  60
AEIREPRKRS RRWLGTFATA EDAARAYDRA AVVLYGHKAQ LNLQDSSSHH HQESSSMSSS  120
RATTSTSSSA QTLRPLLPRP PPPPPQLISS SNAAHDINTY LPFVPALQQQ PPPQQMCSSS  180
SAAAQLYDMS YGNPNPAVEA QGPQLLHGGY DEMNPCCGIV GSGGIESSAA ANAYANSPAA  240
ASAWAHLEGL PGGSGGGGGN GNGGSSSIWD YGDPFFFDGI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A9e-1648103662ATERF1
3gcc_A9e-1648103662ATERF1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00674SELEXTransfer from GRMZM2G093595Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLS8BWT10.0S8BWT1_9LAMI; Abscisic acid insensitive 4-1
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40220.17e-27ERF family protein
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]