PlantRegMap
Plant Transcription Factor Database
PlantTFDB
v5.0
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cotton_A_25482_BGI-A2_v1.0
Common NameF383_19393
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family bZIP
Protein Properties Length: 344aa    MW: 39205.9 Da    PI: 6.5861
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cotton_A_25482_BGI-A2_v1.0genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.16e-116399440
                                XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                      bZIP_1  4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLea 40
                                +k +rr+++NReAAr+sR+RKka++++Le    +L +
  Cotton_A_25482_BGI-A2_v1.0 63 DKTQRRLEQNREAARKSRLRKKAYVQQLESSRLKLAQ 99
                                799**************************84433333 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.7E-855109No hitNo description
SMARTSM003382.2E-660120IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.2262106IPR004827Basic-leucine zipper domain
PfamPF001704.1E-863102IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.41E-764106No hitNo description
CDDcd147081.98E-2164116No hitNo description
PROSITE patternPS0003606782IPR004827Basic-leucine zipper domain
PfamPF141442.7E-28151226IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    Send to blast
MTIYEQLNQI SRWGDSFNRG DSPNTGSSTI VEGDVRLENK AGYISCDQVE PSRSDQETNK  60
PIDKTQRRLE QNREAARKSR LRKKAYVQQL ESSRLKLAQL EQELERTRQQ GIYISSPSDT  120
GYFGLSGTVN SGITAFEMEY GHWVEVQNKQ TCELRSALQA HITDIELQIL VEHGLNHYCN  180
LFRMKADAAK ADVFYLNSGI WRTSAERFFH WIGGFRPSEL LNVVMSHIEP LTDQQQLEVC  240
NLRQSSQQAE DALSQGIDKL QQNFSCSVAS DLSWGHYRAQ MAVATDIIEA LEGFVNQADH  300
LREQTLLQMV RILTTHQAAR GLLALGDYFH RLRALSSLWA THPR
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1 (By similarity). {ECO:0000250, ECO:0000269|PubMed:12953119}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017614473.10.0PREDICTED: transcription factor TGA3-like isoform X1
RefseqXP_017614474.10.0PREDICTED: transcription factor TGA3-like isoform X1
RefseqXP_017614475.10.0PREDICTED: transcription factor TGA3-like isoform X1
RefseqXP_017614476.10.0PREDICTED: transcription factor TGA3-like isoform X1
RefseqXP_017614477.10.0PREDICTED: transcription factor TGA3-like isoform X1
SwissprotQ93ZE21e-148TGA7_ARATH; Transcription factor TGA7
TrEMBLA0A0B0NHC60.0A0A0B0NHC6_GOSAR; Transcription factor TGA7
STRINGGorai.005G092400.10.0(Gossypium raimondii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM30612766
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77920.11e-142bZIP family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]