PlantRegMap
Plant Transcription Factor Database
PlantTFDB
v5.0
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cotton_A_05107_BGI-A2_v1.0
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family bZIP
Protein Properties Length: 56aa    MW: 6789.94 Da    PI: 10.9435
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cotton_A_05107_BGI-A2_v1.0genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1248.3e-081361247
                                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                      bZIP_1 12 kNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47
                                +N+ A  rsR+RKk++++ L+ k+  Le++ ++L  
  Cotton_A_05107_BGI-A2_v1.0  1 RNKNATMRSRERKKMYVKDLKMKSRYLEGKCRRLSH 36
                                8****************************9998876 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF579594.75E-8149No hitNo description
Gene3DG3DSA:1.20.5.1705.9E-8149No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 56 aa     Download sequence    Send to blast
RNKNATMRSR ERKKMYVKDL KMKSRYLEGK CRRLSHDFQC FIAENQALQI FFSSSL
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor involved in endoplasmic reticulum (ER) stress response (PubMed:21223397, PubMed:22050533, PubMed:22199238). Acts downstream of the ER stress sensors IRE1, BZIP39 and BZIP60 to activate BiP chaperone genes (PubMed:22050533, PubMed:22199238). {ECO:0000269|PubMed:21223397, ECO:0000269|PubMed:22050533, ECO:0000269|PubMed:22199238}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By dithiothreitol-induced endoplasmic reticulum (ER) stress response (PubMed:22050533, PubMed:21223397). Induced by salt stress (PubMed:22050533). {ECO:0000269|PubMed:21223397, ECO:0000269|PubMed:22050533}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012468773.11e-22PREDICTED: uncharacterized protein LOC105786840
SwissprotQ69XV01e-15BZP50_ORYSJ; bZIP transcription factor 50
TrEMBLA0A2P5QM418e-24A0A2P5QM41_GOSBA; Uncharacterized protein
STRINGGorai.006G220700.12e-24(Gossypium raimondii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM46342848
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G42990.17e-13basic region/leucine zipper motif 60
Publications ? help Back to Top
  1. Wakasa Y, et al.
    Expression of ER quality control-related genes in response to changes in BiP1 levels in developing rice endosperm.
    Plant J., 2011. 65(5): p. 675-89
    [PMID:21223397]
  2. Lu SJ, et al.
    Conservation of IRE1-regulated bZIP74 mRNA unconventional splicing in rice (Oryza sativa L.) involved in ER stress responses.
    Mol Plant, 2012. 5(2): p. 504-14
    [PMID:22199238]