PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID mrna26707.1-v1.0-hybrid
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family G2-like
Protein Properties Length: 281aa    MW: 32123 Da    PI: 9.9309
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
mrna26707.1-v1.0-hybridgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like23.81e-07105145544
                  G2-like   5 rWtpeLHerFveaveqLGGsekAtPktilelmkvk.gLtle 44 
                               Wt e  ++ ve + qLGG  +AtP ++l lm+   gLt e
  mrna26707.1-v1.0-hybrid 105 SWTVEHYKEVVEKIIQLGGLGVATPDKVLALMDRRlGLTEE 145
                              6*******************************975488864 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.600.0011569IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.608.3E-4105156IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    Send to blast
MSGYYSQTGS LPFSIRWTLE HHKQFLESVV RNGGLNKPQI KQIVSQDIMS RVYGLRSSTI  60
QLHMDYFRQF HQQNESLFKK LPEFDSLVRD FAGLGVEGAN NCWSSWTVEH YKEVVEKIIQ  120
LGGLGVATPD KVLALMDRRL GLTEEILGHI LSRLKMLQER TRIETRLEIL NERLTRIQAY  180
GHGGPMRPVI LQRLGRNVVH PYSREKIIGD ESTTLATIIK SKIDETIMSL RQLVAAHRRE  240
RGDIVEYLVT RAEPREEKME NLVTKMDHIN LGRSGSASSK *
Cis-element ? help Back to Top
SourceLink
PlantRegMapmrna26707.1-v1.0-hybrid
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011469841.10.0PREDICTED: uncharacterized protein LOC105353050
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1760367