PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID mrna22776.1-v1.0-hybrid
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family bZIP
Protein Properties Length: 195aa    MW: 22166 Da    PI: 5.2017
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
mrna22776.1-v1.0-hybridgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1391.7e-12118177160
                              XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                   bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60 
                              +ke +r +r+ +NR++A+  R+RKk ++  Le ++keLe  N+ L +++++l +e   l+
  mrna22776.1-v1.0-hybrid 118 DKEYRRLKRLLRNRVSAQQARERKKVYVNDLESRAKELEDANSNLEEKISTLINENTMLR 177
                              58999***********************************************99988665 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.0E-11118182IPR004827Basic-leucine zipper domain
PfamPF001701.3E-12119178IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.691120183IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.69E-13121181No hitNo description
Gene3DG3DSA:1.20.5.1701.3E-16122182No hitNo description
PROSITE patternPS000360125140IPR004827Basic-leucine zipper domain
CDDcd147042.84E-13132173No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010224Biological Processresponse to UV-B
GO:0080167Biological Processresponse to karrikin
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    Send to blast
MSSSVENQQQ AGSSSSSWRR FNANNSSSSP HSLHDHDKKH KLDVDSFWSR DDGDDDDDDV  60
NPEDSDEDMF TVPDVEAIRP DDNPISTSTV TNNNATSKND PAETGFSGKR RRGRNPVDKE  120
YRRLKRLLRN RVSAQQARER KKVYVNDLES RAKELEDANS NLEEKISTLI NENTMLRKVL  180
MNTRPKVDDS IEQK*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011462861.11e-139PREDICTED: transcription factor HY5-like isoform X2
SwissprotQ8W1912e-47HYH_ARATH; Transcription factor HY5-like
TrEMBLD9ZIR71e-60D9ZIR7_MALDO; BZIP domain class transcription factor
STRINGGLYMA16G13570.17e-52(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF126402633
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G17609.22e-44HY5-homolog