PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID mrna18282.1-v1.0-hybrid
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family bZIP
Protein Properties Length: 163aa    MW: 18594 Da    PI: 7.9861
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
mrna18282.1-v1.0-hybridgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_149.77.8e-1669127563
                              CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                   bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                              kr +r+++NRe+ArrsR RKk++ieeL+  v++L   N++L ++l +l +  + + +e+
  mrna18282.1-v1.0-hybrid  69 KRIKRMISNRESARRSRMRKKKQIEELQHQVDQLHITNRQLSEKLIQLLEGNQHVLQEN 127
                              99********************************************9999988888876 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.7E-1665129IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.65767130IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.13E-1269119No hitNo description
Gene3DG3DSA:1.20.5.1701.1E-1269125No hitNo description
PfamPF001703.0E-1469127IPR004827Basic-leucine zipper domain
CDDcd147023.70E-1670118No hitNo description
PROSITE patternPS0003607287IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 163 aa     Download sequence    Send to blast
MQAVEVVENH SLLSLQNHTQ NPDSIPFYPT RIFSMSHIHD FSSNGSSLNN DTVFDEATAA  60
GEQGLTYEKR IKRMISNRES ARRSRMRKKK QIEELQHQVD QLHITNRQLS EKLIQLLEGN  120
QHVLQENAQL KERVSSLQVI LSDLISPLQR NVEMPPPTPK ST*
Cis-element ? help Back to Top
SourceLink
PlantRegMapmrna18282.1-v1.0-hybrid
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011467186.11e-114PREDICTED: basic leucine zipper 43-like
TrEMBLA0A2P6RCM81e-103A0A2P6RCM8_ROSCH; Putative transcription factor bZIP family
STRINGXP_004305578.11e-115(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF130442430
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60830.13e-32basic leucine-zipper 70