PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID mrna00393.1-v1.0-hybrid
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family bZIP
Protein Properties Length: 321aa    MW: 35828.5 Da    PI: 9.2185
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
mrna00393.1-v1.0-hybridgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.77e-10245296552
                              CHHHCHHHHHHHHHHHHHHHH.....HHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                   bZIP_1   5 krerrkqkNReAArrsRqRKk.....aeieeLeekvkeLeaeNkaLkkeleel 52 
                              +r++r++kNRe+A rsR+RK+     a++ eLe kv  Le+eN++L+k+ +el
  mrna00393.1-v1.0-hybrid 245 RRQKRMIKNRESAARSRARKQrklqqAYTTELEIKVSRLEEENERLRKQ-KEL 296
                              79******************73333367889****************64.444 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1703.6E-12234297No hitNo description
SMARTSM003383.6E-6241314IPR004827Basic-leucine zipper domain
CDDcd147071.64E-21245304No hitNo description
SuperFamilySSF579599.38E-7245295No hitNo description
PfamPF001702.7E-7245294IPR004827Basic-leucine zipper domain
PROSITE patternPS000360248263IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009737Biological Processresponse to abscisic acid
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    Send to blast
MGSQGGADGN CKQSQFQPLT RQNSIYNLTL DEVQNQLGDL GKPLSSMNLD ELLKSVWSAE  60
ANQTMGMDIE GTAMVNQASL QRQASLSLTS ALSKKTVDEV WRDIQQSKDN EEKRSRERQP  120
TLGEMTLEDF LVKAGVVAEA SDKKNTGGPL VGVDANVASQ FPQSQWLQYP HPQYQHPQQS  180
MMGVYIPSQP IPPPMHVGAG AVMDVPYSDN QLAMPSPLMG TLSDTQTPGR KRGNPEDIVE  240
KTVERRQKRM IKNRESAARS RARKQRKLQQ AYTTELEIKV SRLEEENERL RKQKELEKVL  300
PSAPPPEPKY QLRRTTSAPF *
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00409DAPTransfer from AT3G56850Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011468749.10.0PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X2
SwissprotQ9LES31e-104AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBLD9ZIQ30.0D9ZIQ3_MALDO; BZIP domain class transcription factor
STRINGPOPTR_0008s01130.11e-172(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF132034105
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56850.11e-86ABA-responsive element binding protein 3