PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_rscf00000917.1.g00008.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family WRKY
Protein Properties Length: 323aa    MW: 36096.9 Da    PI: 10.2086
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_rscf00000917.1.g00008.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY29.91.1e-09281301324
                                     -SS-EEEEEEE--TT-SS-EEE CS
                            WRKY   3 DgynWrKYGqKevkgsefprsY 24 
                                     D y+WrKYGqK++kgs++p sY
  FANhyb_rscf00000917.1.g00008.1 281 DDYSWRKYGQKPIKGSPHP-SY 301
                                     99****************9.44 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF105337.0E-18232277IPR018872Zn-cluster domain
Gene3DG3DSA:2.20.25.801.7E-9267301IPR003657WRKY domain
PROSITE profilePS5081111.313274299IPR003657WRKY domain
SuperFamilySSF1182901.83E-7277302IPR003657WRKY domain
SMARTSM007740.0095279312IPR003657WRKY domain
PfamPF031068.0E-6281300IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005516Molecular Functioncalmodulin binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    Send to blast
MEEVEEANKA AVASCHRVLS LLSQPQDQVQ FRNLEVETGK AVFRFKKVVS LLNTGLGHAR  60
VRKLKKLQIP FPESVLLDNP NCTTDHHSKT PHFLQSRFAE NPSQDLSLGV RNSLSLGNPS  120
LELSTNNGKT PIQLAQQALP PAHYHFLQQQ QQQQQRLLLQ QQQMKQQAEM MYRRSNSGIN  180
LNFDSSSCTP TMSSTRSFIS SLSIDGSVAN LDGNSFHLIG APISSDQNSQ HKRKCSARGD  240
DGSAKCGSSG RCHCSKKRKH RVKRSIKVPA ISNKLADIPP DDYSWRKYGQ KPIKGSPHPS  300
YWNFAALLAV NLDARQLYKE LEI
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00284DAPTransfer from AT2G30590Download
Motif logo
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By salicylic acid. {ECO:0000269|PubMed:11449049}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004289910.10.0PREDICTED: probable WRKY transcription factor 21 isoform X2
SwissprotO043361e-96WRK21_ARATH; Probable WRKY transcription factor 21
TrEMBLA0A2P6PVJ80.0A0A2P6PVJ8_ROSCH; Putative transcription factor WRKY family
STRINGXP_004289909.10.0(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF26373479
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G30590.11e-81WRKY DNA-binding protein 21