PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_rscf00000878.1.g00001.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family NAC
Protein Properties Length: 546aa    MW: 61060.8 Da    PI: 6.6039
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_rscf00000878.1.g00001.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM81.81.4e-2541401128
                             NAM   1 lppGfrFhPtdeelvveyL..kkkvegkk..leleevikevdiy.kvePwdLpk...kvkaeekewyfFskrdkkyatg 71 
                                     +p+GfrFhPtdeel+ +yL  k+kv + +   e++ v++evd+y ++ePw++ +    ++  +++++fF+k +k +++g
  FANhyb_rscf00000878.1.g00001.1   4 VPVGFRFHPTDEELIRHYLylKNKVIKGPaeEEAAAVVPEVDLYgETEPWRIWEahgGADLYDQDLFFFTKLKKVNPHG 82 
                                     599*************986225666666644344456*****99568*****74233333366799************* PP

                             NAM  72 krknratksgyWkatgkdkevlsk...kgelvglkktLvfykgrapkgektdWvmheyrl 128
                                     +r nr++ +g+W++   ++++++    +++ +g k+ + + +  +++ ++  W m+ey+l
  FANhyb_rscf00000878.1.g00001.1  83 TRINRKIGTGTWSEGEPSRPIFVGekkNKTPIGRKRKFRYEN--KSSDHHGCWYMEEYSL 140
                                     **********************975445555********984..4444699*******98 PP

2NAM286.2e-09186215228
                             NAM   2 ppGfrFhPtdeelvveyLkkkvegkk...l 28 
                                     p+GfrFhPtd+el++++L +k +gk    l
  FANhyb_rscf00000878.1.g00001.1 186 PVGFRFHPTDQELICYFLYNKNKGKGgrgL 215
                                     89********************99984331 PP

3NAM38.53.4e-1232243122128
                             NAM  22 kvegkkleleevikevdiy.kvePwdLpk...kvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgkdkevlsk 95 
                                     +ve  k e   +++e+d++ ++ePw++ +    ++  +++++fF++ +k +++g+r  r + + g+W++   +k++++ 
  FANhyb_rscf00000878.1.g00001.1 322 EVEVGKKEN-MFLHEFDLFgSTEPWEIWEmfrGAELCNQDLFFFTQLKKVNPKGSRIGRkVGSGGTWSEGDVSKPIVDD 399
                                     333333333.469999987367*****75233333355689******************5556899***********98 PP

                             NAM  96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128
                                      +g+ +g k+ L + k  +p+  ++ W ++ey+l
  FANhyb_rscf00000878.1.g00001.1 400 rTGNPIGRKRKLRYEKVGSPH--HACWYLDEYSL 431
                                     68889*********9877777..8********87 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.75E-272154IPR003441NAC domain
PROSITE profilePS5100529.1574156IPR003441NAC domain
PfamPF023651.1E-165140IPR003441NAC domain
SuperFamilySSF1019412.09E-7184210IPR003441NAC domain
PfamPF023656.2E-12186431IPR003441NAC domain
PROSITE profilePS5100518.498301447IPR003441NAC domain
SuperFamilySSF1019414.05E-14332446IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 546 aa     Download sequence    Send to blast
MANVPVGFRF HPTDEELIRH YLYLKNKVIK GPAEEEAAAV VPEVDLYGET EPWRIWEAHG  60
GADLYDQDLF FFTKLKKVNP HGTRINRKIG TGTWSEGEPS RPIFVGEKKN KTPIGRKRKF  120
RYENKSSDHH GCWYMEEYSL DGIKSADYVI CRLRENNRSG GGGTGGNRDS LAISVAASME  180
ASGPIPVGFR FHPTDQELIC YFLYNKNKGK GGRGLAMFMA EEAEAEEEKI KALPAAEGQA  240
ELPEDKNNTN EKEGQAPPPE VEEKKNNGEN EAAAVVPVEE EEKKKKEKGK EKKTEGEMQA  300
APLLLLEYMK DNKEDETLLP REVEVGKKEN MFLHEFDLFG STEPWEIWEM FRGAELCNQD  360
LFFFTQLKKV NPKGSRIGRK VGSGGTWSEG DVSKPIVDDR TGNPIGRKRK LRYEKVGSPH  420
HACWYLDEYS LLDADIGDYV ICRLRKNDKL AAAAFSSAEA VNNRKRKATP STTPATAEES  480
KQPPATAEES KQPPASSKAK RRRITGLTQV EKAAADVLMN MANSTFNHNT LKLFGIEIGS  540
TPIGGE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A3e-13315314165Stress-induced transcription factor NAC1
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1499503KRRRI
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011466904.10.0PREDICTED: uncharacterized protein LOC105352211
TrEMBLA0A2P6RTY00.0A0A2P6RTY0_ROSCH; Putative transcription factor NAM family
STRINGXP_004309935.11e-45(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3426422
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24590.25e-15TCV-interacting protein