PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_icon19849101_s.1.g00001.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family TCP
Protein Properties Length: 109aa    MW: 11796.1 Da    PI: 4.7918
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_icon19849101_s.1.g00001.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP49.31.9e-151623791
                               TCP 37 deLGfdkdsktieWLlqqakpaikeltgtssssasec.......eaesssssasnsssgkaa 91
                                      +eLG+++d++tieWLl+qa+p+i + tg+s ++++ +        ++ +++s++++s +k++
  FANhyb_icon19849101_s.1.g00001.1  1 RELGHKTDGQTIEWLLKQAEPSILAVTGNSVTPSNTSstlvsvnLQAGNVVSEDKNSLRKKC 62
                                      79***************************999997774222222222222222233333333 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5136914.497126IPR017887Transcription factor TCP subgroup
PfamPF036342.3E-11156IPR005333Transcription factor, TCP
Sequence ? help Back to Top
Protein Sequence    Length: 109 aa     Download sequence    Send to blast
RELGHKTDGQ TIEWLLKQAE PSILAVTGNS VTPSNTSSTL VSVNLQAGNV VSEDKNSLRK  60
KCTKGGQPLP PPYDHYLKII TTNYSIEFSV NDVAIDVGIE AQGEDGRQD
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011459878.16e-69PREDICTED: transcription factor TCP8-like
STRINGXP_009359974.11e-13(Pyrus x bretschneideri)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G23280.11e-15TCP family protein