PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_icon19335621_o.1.g00001.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family C2H2
Protein Properties Length: 75aa    MW: 8480.62 Da    PI: 8.2191
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_icon19335621_o.1.g00001.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2171.6e-055375123
                                      EEETTTTEEESSHHHHHHHHHHT CS
                           zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                                      y C+ C++ F++   L  H+++H
  FANhyb_icon19335621_o.1.g00001.1 53 YICGFCKREFKSAQALGGHMNVH 75
                                      89*******************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576672.71E-55075No hitNo description
PROSITE profilePS5015710.2635375IPR007087Zinc finger, C2H2
PROSITE patternPS0002805575IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 75 aa     Download sequence    Send to blast
AESKHRDMQR NSGSCKSLVM TKAIDGDSNT NIKKNTEDDE VCMNVYPWPP RCYICGFCKR  60
EFKSAQALGG HMNVH
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004288457.15e-46PREDICTED: transcriptional regulator SUPERMAN-like
TrEMBLD5LGH18e-43D5LGH1_FRAVR; Superman-like protein FRASUP3
TrEMBLD5LGH52e-43D5LGH5_FRAVR; Superman-like protein (Fragment)
STRINGXP_004288457.12e-45(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF28433171
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42410.11e-15zinc finger protein 11