PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_icon00059882_a.1.g00001.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family ERF
Protein Properties Length: 57aa    MW: 6356.24 Da    PI: 11.5881
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_icon00059882_a.1.g00001.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP230.87.1e-102557235
                               AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgk 35
                                      +y+GVr+++ +g+++AeIrd +  g   +r +lg+
  FANhyb_icon00059882_a.1.g00001.1 25 KYRGVRRRP-WGKFAAEIRDSTRHG-EgARLWLGT 57
                                      8********.**********43333.35****997 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103214.172557IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.3E-122557IPR001471AP2/ERF domain
SuperFamilySSF541713.2E-72557IPR016177DNA-binding domain
PfamPF008471.2E-52557IPR001471AP2/ERF domain
PRINTSPR003673.4E-62637IPR001471AP2/ERF domain
PRINTSPR003673.4E-65157IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 57 aa     Download sequence    Send to blast
VLLGQMEGDS SRGSKAKQEG KKGVKYRGVR RRPWGKFAAE IRDSTRHGEG ARLWLGT
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011457996.11e-29PREDICTED: ethylene-responsive transcription factor ERF096-like
TrEMBLA0A3S8T9503e-29A0A3S8T950_FRAAN; Transcription factor ERF82
STRINGXP_004292207.11e-17(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF27033215
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23220.14e-09ERF family protein