PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_icon00033956_a.1.g00001.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family Nin-like
Protein Properties Length: 85aa    MW: 9160.43 Da    PI: 10.3671
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_icon00033956_a.1.g00001.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK26.61.1e-084974126
                            RWP-RK  1 aekeisledlskyFslpikdAAkeLg 26
                                      aek i+le+l+kyFs+++kdAAk+Lg
  FANhyb_icon00033956_a.1.g00001.1 49 AEKAITLEVLRKYFSGSLKDAAKSLG 74
                                      5899*********************8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 85 aa     Download sequence    Send to blast
MPSAKSSKLR PQDLNVKGVD CVGEFSTIVE GSFSSVGASK TGEKRRTKAE KAITLEVLRK  60
YFSGSLKDAA KSLGGALSND YFAWR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011465572.15e-40PREDICTED: protein NLP5-like isoform X1
RefseqXP_011465573.15e-40PREDICTED: protein NLP5-like isoform X2
TrEMBLM5WEH02e-22M5WEH0_PRUPE; Uncharacterized protein
STRINGGLYMA04G01910.23e-18(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35270.11e-13Nin-like family protein