PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_icon00000662_a.1.g00001.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family Trihelix
Protein Properties Length: 273aa    MW: 32086.2 Da    PI: 9.189
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_icon00000662_a.1.g00001.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix75.21e-2321102186
                          trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsesss 77 
                                       +W  +e+++Li++r e+e++++ +k+ k+lWe+vs++m+ rgf+r+++qCk+kw+nl  ryk  ++++ +    + +
  FANhyb_icon00000662_a.1.g00001.1  21 QWGPEETRELIAIRGELERDSSVAKRSKALWEAVSSRMSTRGFNRTSEQCKCKWKNLLIRYKGKETSDPE----TGR 93 
                                       7**************************************************************9999997....467 PP

                          trihelix  78 tcpyfdqle 86 
                                       +cp+f++l+
  FANhyb_icon00000662_a.1.g00001.1  94 KCPFFEELQ 102
                                       8******97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.79E-51880IPR009057Homeodomain-like
SMARTSM007174.1E-41880IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.606.1E-62078IPR009057Homeodomain-like
PROSITE profilePS500908.2692078IPR017877Myb-like domain
PfamPF138379.1E-2221103No hitNo description
CDDcd122039.09E-202185No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    Send to blast
MYGGGGDEDA MRMMVTSPTG QWGPEETREL IAIRGELERD SSVAKRSKAL WEAVSSRMST  60
RGFNRTSEQC KCKWKNLLIR YKGKETSDPE TGRKCPFFEE LQEVFTERER NMQRLLLESE  120
AGVSRAKKRV KKGRSGRSSD ELSEDPDEDE DDGNGNVKKR KAERVVTPRV MNATASFGSG  180
SGSVPEMLKE FLKQQQRMEI EWREMMERRA RERQLFEQEW QQRMVKVERE RLMVEKAWRE  240
REEQRRMREE SRAERRDALV TSILNKLIDE TNF
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004300404.11e-170PREDICTED: trihelix transcription factor GT-3b-like
RefseqXP_011465302.11e-170PREDICTED: trihelix transcription factor GT-3b-like
TrEMBLM5WBE21e-102M5WBE2_PRUPE; Uncharacterized protein
STRINGGLYMA01G35370.23e-91(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF17813385
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38250.12e-28Trihelix family protein