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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
Previous version:
v3.0
v4.0
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 462935350 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
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Family | bZIP | ||||||||
Protein Properties | Length: 312aa MW: 32720.9 Da PI: 8.4776 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 76.1 | 4.5e-24 | 158 | 220 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkrerrkq+NRe+ArrsR+RK++e+eeL +kv+eL++eN aL+ el++lkk ++ ++ e+ 462935350 158 ERELKRERRKQSNRESARRSRLRKQQECEELGKKVAELTTENNALRAELDNLKKACQDMEVEN 220 89********************************************************99987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF16596 | 1.2E-9 | 28 | 136 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 3.0E-18 | 155 | 216 | No hit | No description |
SMART | SM00338 | 5.4E-21 | 158 | 222 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 4.2E-21 | 158 | 220 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 12.932 | 160 | 223 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.94E-11 | 161 | 215 | No hit | No description |
CDD | cd14702 | 7.57E-20 | 163 | 214 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 165 | 180 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 312 aa Download sequence Send to blast |
MAAAGVPYPT AEAAAAKGKG GGASPEKGSS GAASGEDASR SGDSGSDESS DTRDDDTDHK 60 DSSAPKKRKS GNTSAEGEPS QAVVRYAVVE SPFPVKGRSA SKLPVSAPGR AALPNATPNL 120 NIGMDLWSAS PAFAVPAVQG EASPGLALAR RDGGPVDERE LKRERRKQSN RESARRSRLR 180 KQQECEELGK KVAELTTENN ALRAELDNLK KACQDMEVEN SRLVGGMVHS QGPSVTTTLG 240 MSVEAPKAQQ HDDEGQLRKN TNNNSNGNYV GGSHKQEANT RVVQAAWARQ QQTSVIGPLG 300 HGACSLREAA PF |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 174 | 180 | RRSRLRK |
2 | 174 | 181 | RRSRLRKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Interacts specifically with the 8-bp sequence 5'-CACGTGGC-3'in the abscisic acid response element (ABARE). Also binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | 462935350 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004955801.1 | 1e-151 | DNA-binding protein EMBP-1 | ||||
Swissprot | P25032 | 1e-57 | EMBP1_WHEAT; DNA-binding protein EMBP-1 | ||||
TrEMBL | A0A368PYJ7 | 1e-150 | A0A368PYJ7_SETIT; Uncharacterized protein | ||||
TrEMBL | K3ZU42 | 1e-150 | K3ZU42_SETIT; Uncharacterized protein | ||||
STRING | Pavir.Ba03287.1.p | 1e-153 | (Panicum virgatum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP2160 | 36 | 92 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G35530.1 | 2e-31 | basic region/leucine zipper transcription factor 16 |