PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462935350
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family bZIP
Protein Properties Length: 312aa    MW: 32720.9 Da    PI: 8.4776
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462935350genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_176.14.5e-24158220163
                XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                e+elkrerrkq+NRe+ArrsR+RK++e+eeL +kv+eL++eN aL+ el++lkk ++ ++ e+
  462935350 158 ERELKRERRKQSNRESARRSRLRKQQECEELGKKVAELTTENNALRAELDNLKKACQDMEVEN 220
                89********************************************************99987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF165961.2E-928136No hitNo description
Gene3DG3DSA:1.20.5.1703.0E-18155216No hitNo description
SMARTSM003385.4E-21158222IPR004827Basic-leucine zipper domain
PfamPF001704.2E-21158220IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.932160223IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.94E-11161215No hitNo description
CDDcd147027.57E-20163214No hitNo description
PROSITE patternPS000360165180IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    Send to blast
MAAAGVPYPT AEAAAAKGKG GGASPEKGSS GAASGEDASR SGDSGSDESS DTRDDDTDHK  60
DSSAPKKRKS GNTSAEGEPS QAVVRYAVVE SPFPVKGRSA SKLPVSAPGR AALPNATPNL  120
NIGMDLWSAS PAFAVPAVQG EASPGLALAR RDGGPVDERE LKRERRKQSN RESARRSRLR  180
KQQECEELGK KVAELTTENN ALRAELDNLK KACQDMEVEN SRLVGGMVHS QGPSVTTTLG  240
MSVEAPKAQQ HDDEGQLRKN TNNNSNGNYV GGSHKQEANT RVVQAAWARQ QQTSVIGPLG  300
HGACSLREAA PF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1174180RRSRLRK
2174181RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtInteracts specifically with the 8-bp sequence 5'-CACGTGGC-3'in the abscisic acid response element (ABARE). Also binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Cis-element ? help Back to Top
SourceLink
PlantRegMap462935350
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004955801.11e-151DNA-binding protein EMBP-1
SwissprotP250321e-57EMBP1_WHEAT; DNA-binding protein EMBP-1
TrEMBLA0A368PYJ71e-150A0A368PYJ7_SETIT; Uncharacterized protein
TrEMBLK3ZU421e-150K3ZU42_SETIT; Uncharacterized protein
STRINGPavir.Ba03287.1.p1e-153(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21603692
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.12e-31basic region/leucine zipper transcription factor 16