PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462935275
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family ERF
Protein Properties Length: 223aa    MW: 24210.4 Da    PI: 8.9832
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462935275genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP231.73.9e-101559155
        AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
               s++ GVr+++ +grWvAeI+d +   ++ r +lg   t   Aa+a+++a+  l+g
  462935275 15 SKFVGVRQRP-SGRWVAEIKDTT---QKIRMWLG---T---AARAYDEAACLLRG 59
               79********.7*********32...35****77...7...*********99998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.04E-241567No hitNo description
PfamPF008473.5E-61559IPR001471AP2/ERF domain
SuperFamilySSF541718.5E-131567IPR016177DNA-binding domain
PROSITE profilePS5103213.2741667IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.109.6E-201667IPR001471AP2/ERF domain
SMARTSM003804.8E-261673IPR001471AP2/ERF domain
PRINTSPR003672.3E-61728IPR001471AP2/ERF domain
PRINTSPR003672.3E-64969IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    Send to blast
MELQFQKPRY KAVRSKFVGV RQRPSGRWVA EIKDTTQKIR MWLGTAARAY DEAACLLRGA  60
NTRTNFAGSS PPDSPLASRV RALLNHKKLK KNHGGTVTAT STASPSSSAT SSTTINFAMS  120
SGGVRTPILP AARTLTEEAS YLISASEDQF QLVASQPWAL NACSLPPTDA CSAMAELDKI  180
KPEKESPASP HAMDQAFYDT DDPSDSLWDL PPICPLSCRS LMY
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012699021.12e-70PREDICTED: ethylene-responsive transcription factor RAP2-11-like
TrEMBLA0A0D9WWP32e-69A0A0D9WWP3_9ORYZ; Uncharacterized protein
STRINGOB07G15030.14e-63(Oryza brachyantha)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP39003273
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.11e-33related to AP2 11