PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462928709
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family ERF
Protein Properties Length: 169aa    MW: 18169.9 Da    PI: 4.5979
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462928709genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP241.24e-133574245
        AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAaka 45
                y GVr+++ +gr++AeIr p++   + r++lg f+taeeAa+a
  462928709 35 EYLGVRRRP-WGRYAAEIRNPVT---KERHWLGPFDTAEEAAAA 74
               588******.**********654...5**********8877765 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541711.44E-153495IPR016177DNA-binding domain
SMARTSM003804.8E-2135101IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.1E-223595IPR001471AP2/ERF domain
PROSITE profilePS5103216.7923595IPR001471AP2/ERF domain
PRINTSPR003674.8E-83647IPR001471AP2/ERF domain
PfamPF008471.8E-63674IPR001471AP2/ERF domain
PRINTSPR003674.8E-85874IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 169 aa     Download sequence    Send to blast
MADAAAAHDD EEVLRHQEAP GLPQQRRRRG RASSEYLGVR RRPWGRYAAE IRNPVTKERH  60
WLGPFDTAEE AAAAVAYDLS AIAIAGHAAA RTNFTYPSGA TLQLPEQEYG PVTPAGGYGS  120
TVDDDGFCQL YAGAEVVAEA DDDESLTIAA ILQSFQHQSA LPASPASLY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-122294171Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMap462928709
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025820790.11e-48ethylene-responsive transcription factor LEP-like
TrEMBLA0A2T7D4583e-49A0A2T7D458_9POAL; Uncharacterized protein
STRINGSb07g004655.12e-44(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP18853397
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12890.11e-17ERF family protein