PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462899802
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family bHLH
Protein Properties Length: 205aa    MW: 22378.8 Da    PI: 7.2546
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462899802genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.30.000331631823655
                S-STCHHHHHHHHHHHHHHH CS
        HLH  36 kKlsKaeiLekAveYIksLq 55 
                +  s a++L +Ave+I+ Lq
  462899802 163 RQTSTADMLDLAVEHIRGLQ 182
                4599***************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.102.3E-5161198IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474595.89E-5162199IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    Send to blast
SLPRHSSSPP GFFSSPVVDN GFPSARVGGN EVHQTMSTYN KKMKSPMNLA RQGTLAQISE  60
DVTEHMHAIG PSEESITTSN VVRSFSGGFS IGSWEDSNSI AFSSPSSKAG IHNNDDIIAT  120
LSNYELQFGV TKEANLQMQQ DQVPFRVRAK RGCATHPRSI AERQTSTADM LDLAVEHIRG  180
LQSEVQALKE DKEKCTCRGN HSSRN
Cis-element ? help Back to Top
SourceLink
PlantRegMap462899802
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025825346.12e-99transcription factor bHLH129-like
TrEMBLA0A2S3I7V04e-98A0A2S3I7V0_9POAL; Uncharacterized protein
TrEMBLA0A2T7CWM63e-98A0A2T7CWM6_9POAL; Uncharacterized protein
STRINGPavir.Gb01377.1.p5e-95(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP141882026
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05805.16e-25bHLH family protein