PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462883901
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family bHLH
Protein Properties Length: 418aa    MW: 44110.3 Da    PI: 6.9108
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462883901genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.50.000283143471654
                HHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
        HLH  16 iNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                + ++   L++l+ +      +K + a++L +++eYIk L
  462883901 314 LGDRVTALQQLVAPF-----GKTDTASVLHETIEYIKFL 347
                555666677777776.....8****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.363298347IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.106.3E-8308359IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.33E-4308352No hitNo description
SuperFamilySSF474592.62E-10308366IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 418 aa     Download sequence    Send to blast
MGDHAEMLHA TPAMYNGGGG AAPHGGWWNT VAVPAATCST ELAGFSTWTS ALAASYDMAA  60
EAGKAKSGAT TASSESPGNN SSVTFQEPTG VADAAGVQQP LASFTDWTHL MNNSGVTLHG  120
FLQDGQHDMS SRTDQQQSHI NAPSLMNPSS NNLALQGHHE QDHGHHHQLL SSLGSELLLS  180
PTSPYGGIQS SLLRSLMEPT VAKPAALPGF QQYDQYQQMG QAPPLQFTND AAFWNPSAGF  240
GVPVAAPAQA SSIRVAKTSP APRAATLALK SAMEGVGESS SIIAKKANSE PAFKKPRLET  300
PSPLPTFKVR KEKLGDRVTA LQQLVAPFGK TDTASVLHET IEYIKFLHDQ VSALSAPYLK  360
NGHQVPHLKS SSPDKSKDSH GEISLKGRGL CLVPISSTFA VASEVPVDFW TPFGANFR
Cis-element ? help Back to Top
SourceLink
PlantRegMap462883901
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025822972.10.0transcription factor bHLH112-like
TrEMBLA0A1E5VU630.0A0A1E5VU63_9POAL; Transcription factor bHLH112
STRINGSi010139m0.0(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP22163787
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61660.32e-49bHLH family protein