PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462863174
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family bHLH
Protein Properties Length: 133aa    MW: 13591.4 Da    PI: 7.8851
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462863174genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.61.3e-0995122229
                HHHHHHHHHHHHHHHHHHHHHHHCTSCC CS
        HLH   2 rrahnerErrRRdriNsafeeLrellPk 29 
                +++h ++Er+RR+++N+ ++ Lr+l+P 
  462863174  95 KMSHIAVERNRRKQMNEHLAVLRSLMPC 122
                789************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000837.61E-891127No hitNo description
SuperFamilySSF474594.36E-992128IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088810.94493133IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.5E-894125IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.4E-795124IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 133 aa     Download sequence    Send to blast
MGDGGLCELR HVSDAEDLFS ILETCWEGCM NGAPAGGGGG ATAAAAAFRQ NCTGGGGSVA  60
GGAAKGGGGG PVHKKQKSSS APAIYSVDDV DGEAKMSHIA VERNRRKQMN EHLAVLRSLM  120
PCFYVKRPAE AIK
Cis-element ? help Back to Top
SourceLink
PlantRegMap462863174
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025799200.14e-36transcription factor SPEECHLESS-like
TrEMBLA0A3L6QHE77e-35A0A3L6QHE7_PANMI; Transcription factor SPEECHLESS-like
STRINGSi017482m2e-33(Setaria italica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53210.11e-18bHLH family protein