PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462859189
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family bHLH
Protein Properties Length: 373aa    MW: 39436 Da    PI: 7.2671
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462859189genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH19.22.2e-06205231430
                HHHHHHHHHHHHHHHHHHHHHCTSCCC CS
        HLH   4 ahnerErrRRdriNsafeeLrellPka 30 
                +h+ +Er RR++i +++  L++l+P +
  462859189 205 SHSLAERVRREKISQRMKLLQDLVPGC 231
                8************************86 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000835.46E-5199242No hitNo description
SuperFamilySSF474591.83E-7199236IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS508889.407201262IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.0E-7204233IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 373 aa     Download sequence    Send to blast
MMGQFHHYPQ PQVGGAGAAG LPILENLMPM GHLDQFLADP GFAERAARLS GFDGRAGGAG  60
YGGAVPGQFG IPDAGPVGAL KELELGNGRD ESSVSDPASA SAGMALKAPS DGNAKKRKAS  120
GKGKGKDGAV STSAKDLAKE ESSGKRCKSS DESNGADENS AKGKAAQSTS ENGGKKQGKD  180
STSKPPEPPK DYIHVRARRG EATDSHSLAE RVRREKISQR MKLLQDLVPG CNKFLSMKLA  240
TVNPQLDFNN LPNLLSKDMQ QSCGPLQNSH FPLETSGAPM PYINQGNPLG CSLTNGMDNQ  300
SSMQPLDPAF CRPMNSQHPF LNGVSDSTSQ VGTFWQDDLQ SVVHMDMGQS QEMATSSNSY  360
NGSLQTVHMK MEL
Cis-element ? help Back to Top
SourceLink
PlantRegMap462859189
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004971039.10.0transcription factor bHLH77
TrEMBLA0A0A9KLQ90.0A0A0A9KLQ9_ARUDO; Uncharacterized protein
STRINGSi001242m0.0(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP91938137
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07340.15e-43bHLH family protein