PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462852206
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family bHLH
Protein Properties Length: 305aa    MW: 33348.1 Da    PI: 5.7861
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462852206genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.72.4e-0998145455
                HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
        HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                +h+ +Er RR+ri +++  L++l+P +    +k   Ka +L + ++Y++sLq
  462852206  98 SHSLAERVRRERISQRMKVLQDLVPGC----NKVIGKALMLDEIINYVQSLQ 145
                8*************************9....677*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.93E-1092149No hitNo description
SuperFamilySSF474591.44E-1692159IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.2E-1694157IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.30194144IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.6E-698145IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003539.0E-10100150IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    Send to blast
MRDANAKKRK APAAAKGKGK EPPCQAGEQN ESDAKRCKTD GADKREESPV KPKAEQAGSD  60
ISVEDSGQKP GKGKNAKPVE PPKDYVHVRA RRGQATDSHS LAERVRRERI SQRMKVLQDL  120
VPGCNKVIGK ALMLDEIINY VQSLQRQVEF LSMKLATVNP VDFSNLPALL QKDMFQACGP  180
SASSVFSLES SNSGFPFSDQ GDVFQSFVPN GLENQCALNP LDLALSQATS AQYAFQDGTP  240
SSNLQQRNFW EEDLPSVFQI DNGQSQENGV SAQSFHGFPS DTFTDTSELS FDTGQVQAGH  300
MKMEF
Cis-element ? help Back to Top
SourceLink
PlantRegMap462852206
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015695672.11e-168PREDICTED: transcription factor bHLH78-like, partial
TrEMBLA0A0A9IY981e-180A0A0A9IY98_ARUDO; Uncharacterized protein
STRINGOB08G27870.11e-166(Oryza brachyantha)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP91938137
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68920.32e-53bHLH family protein