PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462849496
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family bHLH
Protein Properties Length: 364aa    MW: 39604.6 Da    PI: 10.9976
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462849496genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.28.2e-05131172247
                HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHH CS
        HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekA 47 
                +  + erE+  Rd++N+ f eL ++l  + +++s+   Ka++L  A
  462849496 131 KNHKAEREKLKRDQLNDLFVELSSMLDLD-RQNSG---KASVLGDA 172
                677899*******************9886.24444...45555555 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.106.3E-7127198IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.88E-10127193IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088810.785129179IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003530.0098135185IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 364 aa     Download sequence    Send to blast
MCRGTAAWVT QVFGWVAATR SLRVLAALLF PFPLASSLPL PRTTLRSRLL LASFLPANSP  60
RLFPAPPPGA ARSPVRKTGR EPRSAGTEEN NLGMVADTES SDSLPGSSNA TADKPINGPP  120
DQRSQERNPK KNHKAEREKL KRDQLNDLFV ELSSMLDLDR QNSGKASVLG DAARVLRDLI  180
TQVESLRKEQ SALLAERQYV SSEKKELLEE NTTIKARISE LKNELHTRMG NNSINLSSLG  240
MSHQMANATN PGLATQPMQH QIWSSIPNLS SVAMTHSTNT ASPLHSRQHG PAASQVHASR  300
PQELQLFPGT SSSPKRECSQ LRSAPASTPS LTDSLPGRLQ LSLPQSSQEG SSSVPRSRRE  360
RKNG
Cis-element ? help Back to Top
SourceLink
PlantRegMap462849496
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025826529.11e-122transcription factor BHLH062-like isoform X1
TrEMBLA0A0A9CGL01e-133A0A0A9CGL0_ARUDO; Uncharacterized protein
STRINGPavir.Ha00418.1.p1e-123(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP129592124
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47640.31e-32bHLH family protein