PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Thhalv10027117m
Common NameEUTSA_v10027117mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
Family bZIP
Protein Properties Length: 246aa    MW: 28612.8 Da    PI: 5.9159
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Thhalv10027117mgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_138.13.3e-12133178550
                      CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 
                      ++ +r+++NRe+ArrsR RK+  i++L++ v  L+ eN++L ++l 
  Thhalv10027117m 133 RKRKRMESNRESARRSRMRKQSHIDNLRNQVNRLDLENRELGNRLR 178
                      67899**********************************9995554 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.8E-10124179No hitNo description
SMARTSM003385.9E-14129193IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.887131194IPR004827Basic-leucine zipper domain
PfamPF001704.0E-9133177IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.53E-10133182No hitNo description
CDDcd147022.59E-17134180No hitNo description
PROSITE patternPS000360136151IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    Send to blast
MLSTVPAFSF SEPGLVNHFS GFQTGFTPWE WDSPDLFSVN QLSLEPAVPS PCYCESDTGL  60
VRINSGFDDT KSGSDEPCAD FIETKPRFDD VDISHGEPDS DDPKHLTSNP NLDSGEQNHN  120
RNIFSQPEMT DERKRKRMES NRESARRSRM RKQSHIDNLR NQVNRLDLEN RELGNRLRLV  180
IYQLQRVNTD NNRLLTEQEI LRLRLSEMRR ILINRQLQQQ QHWELYNRRM NMAAQNPSSI  240
IDHMI*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1145152RRSRMRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006411856.10.0hypothetical protein EUTSA_v10027117mg
TrEMBLV4MAA10.0V4MAA1_EUTSA; Uncharacterized protein
STRINGAT4G37730.11e-118(Arabidopsis thaliana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM78551840
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37730.11e-107basic leucine-zipper 7