PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Thhalv10025822m
Common NameEUTSA_v10025822mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
Family bZIP
Protein Properties Length: 305aa    MW: 33403.6 Da    PI: 10.72
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Thhalv10025822mgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_123.51.2e-07224245526
                      CHHHCHHHHHHHHHHHHHHHHH CS
           bZIP_1   5 krerrkqkNReAArrsRqRKka 26 
                      +r +r++kNRe+A rsR+RK++
  Thhalv10025822m 224 RRHKRMIKNRESAARSRARKQE 245
                      699******************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.3E-6216295IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.2E-11220285No hitNo description
SuperFamilySSF579597.74E-7224284No hitNo description
CDDcd147075.51E-24224289No hitNo description
PROSITE patternPS000360227242IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009911Biological Processpositive regulation of flower development
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:2000028Biological Processregulation of photoperiodism, flowering
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0043621Molecular Functionprotein self-association
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    Send to blast
MLSSAKHQRN HRVSATNKNK TLNQVSSISS SSPSSSSSSS SSSSSSSFST SFSPSPIHSQ  60
DSQAHKRSLV TMEEVWKDIN LGSIHHLNRH SQHPQHSQEP RFRGHNHQSQ NPNSIFQDFL  120
NRPLNQEPTI PTSLTMGSAS NGDTTTVTAL FSSSPLAPPA TVLSLNSGAG FEFLDSQDPL  180
VTPSSNLHNL ANVSSFNTPF DALVTSTCFG KKRGQESNEG SGNRRHKRMI KNRESAARSR  240
ARKQECFLGF DSHLQAYTNE LELEVAHLQA ENARLKRQQD QLRTAAANQQ PKKNTLQRSS  300
TAPF*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankGQ1771311e-163GQ177131.1 Arabidopsis thaliana ecotype Wt-5 FD gene, complete sequence.
GenBankGQ1771281e-163GQ177128.1 Arabidopsis thaliana ecotype Nok-3 FD gene, complete sequence.
GenBankGQ1771271e-163GQ177127.1 Arabidopsis thaliana ecotype Mt-0 FD gene, complete sequence.
GenBankGQ1771261e-163GQ177126.1 Arabidopsis thaliana ecotype Ms-0 FD gene, complete sequence.
GenBankGQ1771251e-163GQ177125.1 Arabidopsis thaliana ecotype Mrk-0 FD gene, complete sequence.
GenBankGQ1771241e-163GQ177124.1 Arabidopsis thaliana ecotype Ll-0 FD gene, complete sequence.
GenBankGQ1771221e-163GQ177122.1 Arabidopsis thaliana ecotype Gy-0 FD gene, complete sequence.
GenBankGQ1771211e-163GQ177121.1 Arabidopsis thaliana ecotype Ga-0 FD gene, complete sequence.
GenBankGQ1771201e-163GQ177120.1 Arabidopsis thaliana ecotype Ei-2 FD gene, complete sequence.
GenBankGQ1771191e-163GQ177119.1 Arabidopsis thaliana ecotype Edi-0 FD gene, complete sequence.
GenBankGQ1771181e-163GQ177118.1 Arabidopsis thaliana ecotype Ct-1 FD gene, complete sequence.
GenBankGQ1771171e-163GQ177117.1 Arabidopsis thaliana ecotype Br-0 FD gene, complete sequence.
GenBankGQ1771161e-163GQ177116.1 Arabidopsis thaliana ecotype Bay-0 FD gene, complete sequence.
GenBankGQ1771151e-163GQ177115.1 Arabidopsis thaliana ecotype An-1 FD gene, complete sequence.
GenBankGQ1771141e-163GQ177114.1 Arabidopsis thaliana ecotype Wei-0 FD gene, complete sequence.
GenBankGQ1771131e-163GQ177113.1 Arabidopsis thaliana ecotype Ws-0 FD gene, complete sequence.
GenBankGQ1771111e-163GQ177111.1 Arabidopsis thaliana ecotype C24 FD gene, complete sequence.
GenBankGQ1771101e-163GQ177110.1 Arabidopsis thaliana ecotype Cvi-0 FD gene, complete sequence.
GenBankGQ1771091e-163GQ177109.1 Arabidopsis thaliana ecotype Ag-0 FD gene, complete sequence.
GenBankCP0026871e-163CP002687.1 Arabidopsis thaliana chromosome 4 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006412047.10.0hypothetical protein EUTSA_v10025822mg
SwissprotQ84JK21e-142FD_ARATH; Protein FD
TrEMBLV4LSE70.0V4LSE7_EUTSA; Uncharacterized protein
STRINGAl_scaffold_0007_4531e-148(Arabidopsis lyrata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM19342772
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35900.11e-141bZIP family protein